Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS24085 and BPHYT_RS24090 overlap by 26 nucleotidesBPHYT_RS24090 and BPHYT_RS24095 are separated by 39 nucleotidesBPHYT_RS24095 and BPHYT_RS24100 are separated by 207 nucleotidesBPHYT_RS24100 and BPHYT_RS24105 are separated by 298 nucleotides BPHYT_RS24085: BPHYT_RS24085 - hypothetical protein, at 971,188 to 971,400 _RS24085 BPHYT_RS24090: BPHYT_RS24090 - ubiquinol oxidase subunit II, cyanide insensitive, at 971,375 to 972,379 _RS24090 BPHYT_RS24095: BPHYT_RS24095 - membrane protein, at 972,419 to 973,831 _RS24095 BPHYT_RS24100: BPHYT_RS24100 - hypothetical protein, at 974,039 to 974,299 _RS24100 BPHYT_RS24105: BPHYT_RS24105 - chloroperoxidase, at 974,598 to 975,419 _RS24105
Group Condition BPHYT_RS24085 BPHYT_RS24090 BPHYT_RS24095 BPHYT_RS24100 BPHYT_RS24105
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. -6.1 N.D. -1.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -5.5 N.D. -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. -5.1 N.D. -0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X N.D. N.D. -4.4 N.D. -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. -4.0 N.D. -1.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. -5.4 N.D. +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -4.2 N.D. -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. -4.4 N.D. -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. -3.9 N.D. -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -4.1 N.D. +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. -5.4 N.D. +2.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -3.2 N.D. +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -2.5 N.D. -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -2.9 N.D. +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -2.1 N.D. -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -2.3 N.D. -0.1
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 N.D. N.D. -1.6 N.D. -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. -3.6 N.D. +1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. -2.5 N.D. +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -3.0 N.D. +1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -2.3 N.D. +0.4
phage 24hr PHYTO3 MOI 10 N.D. N.D. +1.0 N.D. -1.8
phage 24hr PHYTO8 MOI 1 N.D. N.D. +0.8 N.D. -1.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +1.9 N.D. -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +2.0 N.D. -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. N.D. -0.1 N.D. +2.2
phage 24hr PHYTO2 MOI 0.1 N.D. N.D. +1.6 N.D. +0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +1.8 N.D. +0.5
nophagecontrol 36hr Phyto Lib only N.D. N.D. +1.9 N.D. +0.5
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. -0.1 N.D. +2.8
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