Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS23640 and BPHYT_RS23645 are separated by 113 nucleotidesBPHYT_RS23645 and BPHYT_RS23650 are separated by 160 nucleotidesBPHYT_RS23650 and BPHYT_RS23655 are separated by 90 nucleotidesBPHYT_RS23655 and BPHYT_RS23660 are separated by 60 nucleotides BPHYT_RS23640: BPHYT_RS23640 - hypothetical protein, at 874,774 to 875,472 _RS23640 BPHYT_RS23645: BPHYT_RS23645 - phosphohydrolase, at 875,586 to 876,230 _RS23645 BPHYT_RS23650: BPHYT_RS23650 - hypothetical protein, at 876,391 to 876,729 _RS23650 BPHYT_RS23655: BPHYT_RS23655 - peroxiredoxin, at 876,820 to 877,296 _RS23655 BPHYT_RS23660: BPHYT_RS23660 - manganese transporter, at 877,357 to 879,015 _RS23660
Group Condition BPHYT_RS23640 BPHYT_RS23645 BPHYT_RS23650 BPHYT_RS23655 BPHYT_RS23660
phage P. phyto PHYTO2 MOI 1 -0.1 -1.4 -3.4 N.D. +0.3
carbon source Sebacic (C) +0.2 -0.4 -3.9 N.D. -0.3
phage 24hr PHYTO3 MOI 10 +0.0 -1.1 -2.8 N.D. -0.2
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.2 -0.4 -3.3 N.D. -0.3
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.2 +0.4 -4.1 N.D. +0.1
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.2 -0.2 -3.1 N.D. -0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.0 +0.3 -3.5 N.D. -0.3
phage 24hr PHYTO1 MOI 10 +0.1 -0.8 -2.7 N.D. +0.1
phage 24hr PHYTO6 MOI 0.1 +0.3 -1.0 -2.6 N.D. -0.1
phage 36hr PHYTO4 MOI 1 +0.1 -0.7 -2.3 N.D. -0.3
phage 36hr PHYTO9 MOI 1 +0.1 -0.7 -2.6 N.D. +0.1
supernatant control Vogels_fungal_media 0.1X -0.3 -0.9 -1.8 N.D. -0.2
nutrient Min media with glucose -0.0 -0.1 -2.7 N.D. -0.2
phage 36hr PHYTO7 MOI 1 +0.1 -1.1 -2.3 N.D. +0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.4 -0.1 -2.4 N.D. +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -0.1 -2.6 N.D. +0.1
vitamin No vitamins t1 +0.1 -0.5 -2.2 N.D. -0.1
phage 36hr PHYTO1 MOI 1 -0.2 -0.1 -2.4 N.D. +0.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.4 -0.4 -1.7 N.D. -0.2
phage 24hr PHYTO6 MOI 10 -0.3 +0.0 -2.4 N.D. -0.1
nophagecontrol 24hr Phyto Lib Only -0.0 +0.1 -2.6 N.D. -0.0
phage 24hr PHYTO4 MOI 0.1 +0.1 +0.2 -2.5 N.D. -0.2
nophagecontrol 36hr Phyto Lib only +0.0 -0.2 -2.4 N.D. +0.2
phage 24hr PHYTO7 MOI 1 -0.4 +0.5 -2.5 N.D. +0.3
phage 24hr PHYTO11 MOI 1 +0.4 -0.0 -2.4 N.D. +0.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.1 +0.3 -2.4 N.D. +0.1
phage 24hr PHYTO11 MOI 0.1 +0.4 +0.5 -2.5 N.D. +0.0
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 -0.8 -0.5 N.D. +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.1 +2.0 -1.6 N.D. +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +0.7 +1.2 N.D. +0.3
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