Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

Group	Condition	BPHYT_RS22995	BPHYT_RS23000	BPHYT_RS23005	BPHYT_RS23010	BPHYT_RS23015
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.4	N.D.	N.D.	-1.1	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.5	N.D.	N.D.	-0.6	-0.8
phage	36hr PHYTO3 MOI 1	-0.3	N.D.	N.D.	-0.6	-0.7
phage	36hr PHYTO8 MOI 10	-0.3	N.D.	N.D.	-0.1	-0.9
phage	36hr PHYTO2 MOI 1	-0.4	N.D.	N.D.	+0.1	-0.9
phage	36hr PHYTO6 MOI 0.1	-0.3	N.D.	N.D.	-0.4	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.1	N.D.	N.D.	-0.8	-0.6
phage	24hr PHYTO3 MOI 1	+0.0	N.D.	N.D.	-0.4	-0.7
nophagecontrol	24hr Phyto Lib only	+0.2	N.D.	N.D.	-0.4	-0.9
phage	24hr PHYTO3 MOI 10	-0.4	N.D.	N.D.	-0.7	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.3	N.D.	N.D.	-0.6	+0.4
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.7	N.D.	N.D.	-0.1	-0.8
phage	P. phyto corn MOI 0.1	-0.8	N.D.	N.D.	+0.3	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.3	N.D.	N.D.	-0.8	+0.5
nitrogen source	L-Lysine (N)	-0.7	N.D.	N.D.	+0.3	+0.5
carbon source	Phenylacetic 5 mM (C)	+0.1	N.D.	N.D.	-0.5	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-0.3	N.D.	N.D.	+0.9	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.5	N.D.	N.D.	+0.6	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3	N.D.	N.D.	+0.1	+0.8
carbon source	Phenylacetic 5 mM (C)	-0.4	N.D.	N.D.	+0.2	+0.7
phage	24hr PHYTO4 MOI 10	+0.2	N.D.	N.D.	-0.3	+0.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB	+0.3	N.D.	N.D.	-0.0	+0.8
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6	N.D.	N.D.	-0.0	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.0	N.D.	N.D.	+0.8	+0.3
supernatant control	Vogels_fungal_media 0.1X	+0.5	N.D.	N.D.	+0.0	+0.6
stress	Paraquat dichloride 0.032 mg/ml	+0.3	N.D.	N.D.	+0.5	+0.5
carbon source	Malonic (C)	+0.0	N.D.	N.D.	+0.1	+1.3
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB	+0.2	N.D.	N.D.	+0.6	+0.6
supernatant control	Vogels_fungal_media; pH 5.5	+0.3	N.D.	N.D.	-0.1	+1.3
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	+0.4	N.D.	N.D.	+0.5	+0.6