Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS22840 and BPHYT_RS22845 are separated by 145 nucleotidesBPHYT_RS22845 and BPHYT_RS22850 are separated by 213 nucleotidesBPHYT_RS22850 and BPHYT_RS22855 are separated by 210 nucleotidesBPHYT_RS22855 and BPHYT_RS22860 are separated by 126 nucleotides BPHYT_RS22840: BPHYT_RS22840 - motility protein B, at 684,247 to 684,915 _RS22840 BPHYT_RS22845: BPHYT_RS22845 - hypothetical protein, at 685,061 to 685,309 _RS22845 BPHYT_RS22850: BPHYT_RS22850 - thioredoxin, at 685,523 to 686,089 _RS22850 BPHYT_RS22855: BPHYT_RS22855 - aldehyde-activating protein, at 686,300 to 686,671 _RS22855 BPHYT_RS22860: BPHYT_RS22860 - chemotaxis protein CheY, at 686,798 to 687,538 _RS22860
Group Condition BPHYT_RS22840 BPHYT_RS22845 BPHYT_RS22850 BPHYT_RS22855 BPHYT_RS22860
phage P. phyto PHYTO2 MOI 1 +0.1 N.D. +0.2 -4.0 -4.9
phage 24hr PHYTO3 MOI 10 -1.2 N.D. +0.1 -0.7 -2.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 N.D. -0.8 -0.5 -1.6
nitrogen source L-Serine (N) -0.2 N.D. -0.1 -0.5 -2.4
phage 24hr PHYTO3 MOI 10 -0.6 N.D. -0.8 -1.0 -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 N.D. -0.6 -0.9 -1.7
phage 36hr PHYTO10 MOI 10 -1.2 N.D. +0.1 -0.1 -1.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.7 N.D. +0.1 -1.0 -1.0
phage 36hr PHYTO4 MOI 1 -0.8 N.D. -0.7 +0.2 -1.2
carbon source Phenylacetic 5 mM (C) -0.1 N.D. +0.2 -1.2 -1.3
phage 36hr PHYTO3 MOI 1 -0.8 N.D. -0.5 -1.6 +0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 N.D. -0.8 +0.2 -1.5
phage 36hr PHYTO6 MOI 0.1 -1.6 N.D. -0.4 -0.1 +0.8
phage 24hr PHYTO6 MOI 0.1 -1.5 N.D. -0.9 +0.6 +0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 N.D. +1.1 -0.6 -2.2
phage 36hr PHYTO8 MOI 10 -1.1 N.D. -0.7 +0.8 -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 N.D. +0.5 -0.3 -1.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 N.D. +0.4 +0.4 -1.6
phage 36hr PHYTO6 MOI 1 -1.1 N.D. -0.9 +0.4 +1.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 N.D. +0.9 -0.8 -1.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 N.D. +0.2 -1.1 +1.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 N.D. -0.4 -0.1 +2.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.1 N.D. -0.2 -0.7 +2.4
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +3.2 N.D. -0.5 -0.3 -1.0
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.2 N.D. +0.4 -0.6 +2.0
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.7 N.D. -0.3 -0.1 +2.1
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +3.1 N.D. -0.4 +0.2 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 N.D. +0.5 +0.6 +1.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 N.D. +1.4 +0.8 -0.3
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +3.4 N.D. -0.4 +0.3 -0.5
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