Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS22050 and BPHYT_RS22055 are separated by 181 nucleotidesBPHYT_RS22055 and BPHYT_RS22060 are separated by 923 nucleotidesBPHYT_RS22060 and BPHYT_RS22065 are separated by 218 nucleotidesBPHYT_RS22065 and BPHYT_RS22070 are separated by 514 nucleotides BPHYT_RS22050: BPHYT_RS22050 - peptide ABC transporter substrate-binding protein, at 501,857 to 503,473 _RS22050 BPHYT_RS22055: BPHYT_RS22055 - DNA-binding protein, at 503,655 to 504,227 _RS22055 BPHYT_RS22060: BPHYT_RS22060 - amino acid transporter, at 505,151 to 506,692 _RS22060 BPHYT_RS22065: BPHYT_RS22065 - DNA-binding protein, at 506,911 to 508,383 _RS22065 BPHYT_RS22070: BPHYT_RS22070 - DNA-binding protein, at 508,898 to 509,350 _RS22070
Group Condition BPHYT_RS22050 BPHYT_RS22055 BPHYT_RS22060 BPHYT_RS22065 BPHYT_RS22070
carbon source Phenylacetic 5 mM (C) -0.6 -1.9 +0.5 +0.3 N.D.
stress Nickel (II) chloride 1 mM +0.5 -0.3 -1.4 +0.1 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.5 -1.1 +0.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 -0.5 -0.6 +0.5 N.D.
phage 36hr PHYTO8 MOI 10 -0.7 +0.5 +0.6 -0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 -0.3 -0.8 +0.7 N.D.
nophagecontrol 24hr Phyto Lib Only -0.6 +0.3 +0.7 -0.3 N.D.
phage 24hr PHYTO3 MOI 10 -0.1 +0.3 +0.8 -0.9 N.D.
phage 24hr PHYTO10 MOI 10 -0.4 +0.4 +0.9 -0.6 N.D.
phage 36hr PHYTO2 MOI 1 -0.4 +0.8 +0.4 -0.4 N.D.
phage 24hr PHYTO3 MOI 10 -0.5 +0.5 +0.9 -0.4 N.D.
phage 24hr PHYTO3 MOI 0.1 -0.2 +0.6 +0.7 -0.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.3 +1.2 -0.5 +0.3 N.D.
nitrogen source L-Lysine (N) -0.2 -0.5 +1.2 +0.3 N.D.
phage 36hr PHYTO7 MOI 1 +0.2 +0.7 +0.5 -0.6 N.D.
phage 24hr PHYTO3 MOI 1 -0.3 +0.8 +0.8 -0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 +1.7 -0.5 +0.2 N.D.
phage 36hr PHYTO3 MOI 1 -0.2 +0.9 +0.9 -0.2 N.D.
phage 24hr PHYTO6 MOI 10 -0.3 +0.8 +1.0 -0.0 N.D.
phage 24hr PHYTO10 MOI 10 -0.3 +0.7 +1.0 +0.2 N.D.
phage 36hr PHYTO10 MOI 10 -0.4 +0.8 +1.2 +0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 +1.7 +0.0 +0.2 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) +1.1 +0.1 +0.7 -0.1 N.D.
phage 24hr PHYTO4 MOI 10 +0.1 +0.6 +0.9 +0.3 N.D.
phage 36hr PHYTO3 MOI 1 -0.1 +1.1 +0.9 +0.0 N.D.
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.1 +1.7 -0.0 +0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.1 +2.8 -0.0 -0.5 N.D.
phage 36hr PHYTO10 MOI 10 +0.2 +0.8 +1.2 +0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +3.8 -0.8 +0.5 N.D.
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 +7.8 +0.2 -0.1 N.D.
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