Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS21300	BPHYT_RS21305	BPHYT_RS21310	BPHYT_RS21315	BPHYT_RS21320
phage	PHYTO3 MOI 0.1	-0.9	-0.1	-0.0	-0.7	-0.1
phage	36hr PHYTO8 MOI 10	-1.0	+0.0	+0.0	-0.5	-0.3
carbon source	Phenylacetic 5 mM (C)	-0.4	-0.1	-0.2	-1.1	+0.1
phage	24hr PHYTO6 MOI 1	-0.7	+0.3	-0.5	-0.6	-0.1
motility	inner cut, LB soft agar motility assay	-0.9	-0.2	+0.1	-0.2	-0.3
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-0.5	-0.3	+0.0	-0.3	-0.4
phage	P. phyto PHYTO2 MOI 1	-0.5	-0.3	+0.1	-0.5	-0.0
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB	+0.4	-0.2	-0.2	-1.0	-0.1
phage	24hr PHYTO9 MOI 10	-0.6	+0.2	-0.2	-0.4	-0.1
carbon source	Suberic (C)	-0.4	+0.2	+0.2	-0.6	-0.3
nophagecontrol	24hr Phyto Lib Only	-0.4	+0.3	-0.1	-0.8	-0.1
carbon source	Sebacic (C)	-0.5	+0.4	-0.1	-0.7	+0.0
phage	24hr PHYTO3 MOI 10	-0.4	+0.1	+0.3	-1.0	+0.0
phage	24hr PHYTO10 MOI 10	-0.5	+0.3	+0.1	-0.6	-0.1
phage	36hr PHYTO4 MOI 1	-1.0	+0.4	-0.3	-0.0	+0.1
phage	24hr PHYTO10 MOI 1	-0.8	-0.2	+0.0	+0.4	-0.3
phage	36hr PHYTO4 MOI 1	-0.8	-0.3	+0.1	+0.6	-0.1
phage	36hr PHYTO6 MOI 0.1	-0.3	+0.2	+0.2	-0.4	-0.2
phage	36hr PHYTO6 MOI 1	-0.8	+0.3	-0.2	+0.0	+0.3
phage	36hr PHYTO8 MOI 10	-0.2	+0.6	+0.1	-1.0	+0.0
lb_dap plate control and outgrow on gent	LB_DAP agar plate, outgrowth in LB_gent	-0.4	-0.1	+0.3	-0.4	+0.2
phage	P. phyto PHYTO2 MOI 0.1	-0.7	+0.2	-0.2	+0.2	+0.0
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.4	-0.2	-0.1	-0.7	+0.2
phage	36hr PHYTO10 MOI 10	-1.0	+0.2	-0.1	+0.6	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	-0.3	+0.1	+0.9	-0.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4	+0.0	+0.0	+0.9	-0.0
phage	24hr PHYTO3 MOI 10	+0.5	-0.2	-0.0	+0.3	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.8	-0.3	+0.1	+0.3	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+1.2	+0.1	-0.2	+0.2	-0.1
tn7 efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50	+0.7	+0.2	+0.0	+0.2	+0.2