Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS21275	BPHYT_RS21280	BPHYT_RS21285	BPHYT_RS21290	BPHYT_RS21295
phage	36hr PHYTO4 MOI 0.1	-0.2	+0.2	+0.1	-0.8	-1.3
phage	24hr PHYTO6 MOI 0.1	-0.6	+0.3	+0.1	-0.7	-0.5
phage	24hr PHYTO6 MOI 0.1	-0.3	+0.4	-0.0	-0.6	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	-0.2	-0.9	-0.3	+0.4	-0.4
carbon source	Phenylacetic 5 mM (C)	+0.2	-0.2	-0.7	+0.1	-0.7
in planta	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1	-0.2	-0.5	+0.5	-0.9	-0.3
phage	24hr PHYTO3 MOI 10	-0.1	+0.4	-0.7	-0.4	-0.3
nitrogen source	L-Lysine (N)	-0.7	+0.6	-0.5	-0.3	-0.0
phage	36hr PHYTO7 MOI 0.1	+0.2	+0.2	+0.2	-0.3	-1.2
nophagecontrol	24hr Phyto Lib Only	-0.4	+0.5	-0.6	+0.0	-0.4
phage	24hr PHYTO1 MOI 10	-0.3	-0.1	+0.6	-0.2	-0.7
nophagecontrol	24hr Phyto Lib Only	-0.3	+0.6	-0.3	-0.1	-0.6
phage	36hr PHYTO2 MOI 0.1	-0.1	+0.6	+0.2	-0.3	-1.1
phage	36hr PHYTO10 MOI 10	-0.3	+0.7	-0.4	+0.1	-0.6
phage	36hr PHYTO4 MOI 1	-0.1	+0.6	+0.2	-0.7	-0.6
phage	36hr PHYTO10 MOI 10	-0.4	+0.3	+1.1	-0.4	-1.2
phage	24hr PHYTO10 MOI 1	-0.2	+0.6	+0.2	+0.2	-1.3
carbon source	Sebacic (C)	+0.4	-1.0	+0.4	-0.2	-0.1
phage	24hr PHYTO MOI 0.1	-0.5	+0.4	+0.5	-0.5	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.2	+0.3	-0.9	+0.5	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.4	-0.3	+0.4	+0.2	-0.8
phage	36hr PHYTO10 MOI 1	-0.1	+0.6	+0.5	+0.0	-1.1
phage	36hr PHYTO6 MOI 1	-0.6	+0.5	+0.5	-0.4	-0.1
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-0.2	-1.0	+0.8	+0.3	+0.1
phage	36hr PHYTO7 MOI 1	-0.1	+0.3	+0.8	+0.0	-0.9
phage	36hr PHYTO1 MOI 1	+0.1	+0.6	-0.0	+0.3	-0.9
phage	24hr PHYTO1 MOI 10	+0.2	+0.7	+0.4	-0.3	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.4	+1.1	-0.4	+0.0	+0.3
phage	24hr PHYTO2 MOI 0.1	+0.4	+0.4	+0.5	-0.5	-0.1
stress	Nickel (II) chloride 1 mM	+0.2	+0.2	+1.4	-0.2	-0.2