Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS21260 and BPHYT_RS21265 overlap by 1 nucleotidesBPHYT_RS21265 and BPHYT_RS21270 are separated by 57 nucleotidesBPHYT_RS21270 and BPHYT_RS21275 are separated by 105 nucleotidesBPHYT_RS21275 and BPHYT_RS21280 are separated by 216 nucleotides BPHYT_RS21260: BPHYT_RS21260 - ABC transporter permease, at 330,662 to 331,540 _RS21260 BPHYT_RS21265: BPHYT_RS21265 - ABC transporter permease, at 331,540 to 332,478 _RS21265 BPHYT_RS21270: BPHYT_RS21270 - dihydroxy-acid dehydratase, at 332,536 to 334,296 _RS21270 BPHYT_RS21275: BPHYT_RS21275 - short-chain dehydrogenase, at 334,402 to 335,007 _RS21275 BPHYT_RS21280: BPHYT_RS21280 - hypothetical protein, at 335,224 to 335,676 _RS21280
Group Condition BPHYT_RS21260 BPHYT_RS21265 BPHYT_RS21270 BPHYT_RS21275 BPHYT_RS21280
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.0 -0.1 -0.2 -0.2 -1.0
phage 24hr PHYTO6 MOI 0.1 -0.3 -0.3 -0.3 -0.6 +0.3
carbon source Tween 20 (C) +0.1 -0.2 +0.2 -0.2 -1.0
phage P. phyto PHYTO2 MOI 1 -0.4 -0.4 -0.4 -0.1 +0.2
phage 36hr PHYTO6 MOI 0.1 -0.6 -0.2 -0.6 +0.1 +0.3
phage 24hr PHYTO3 MOI 10 -0.3 -0.4 -0.5 +0.0 +0.4
phage 24hr PHYTO10 MOI 10 -0.2 -0.1 -0.7 -0.2 +0.3
phage 24hr PHYTO6 MOI 0.1 -0.0 -0.3 -0.6 -0.3 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +0.1 -0.3 -0.2 -0.7
phage 36hr PHYTO10 MOI 10 -0.0 -0.5 -0.6 -0.3 +0.7
phage 24hr PHYTO MOI 0.1 -0.0 -0.2 -0.6 -0.3 +0.4
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.2 -0.4 -0.3 -0.3 +0.5
phage 36hr PHYTO6 MOI 1 -0.2 -0.3 -0.1 -0.6 +0.5
nophagecontrol 36hr Phyto Lib only -0.5 -0.1 -0.7 -0.1 +0.6
nitrogen source L-Isoleucine (N) +0.1 +0.3 -0.4 -0.5 -0.1
carbon source Sebacic (C) +0.1 +0.1 -0.1 +0.4 -1.0
phage 36hr PHYTO3 MOI 1 -0.1 -0.2 -0.8 +0.3 +0.3
phage 24hr PHYTO8 MOI 1 -0.2 +0.2 -0.9 +0.1 +0.5
nophagecontrol 24hr Phyto Lib Only -0.1 +0.1 -0.4 -0.4 +0.5
phage 36hr PHYTO10 MOI 10 -0.0 +0.4 -0.5 -0.4 +0.3
phage 36hr PHYTO8 MOI 10 -0.2 +0.3 -0.7 -0.2 +0.7
phage 36hr PHYTO3 MOI 1 -0.1 -0.2 -0.6 -0.1 +1.0
nitrogen source L-Lysine (N) -0.2 +0.4 -0.1 -0.7 +0.6
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.5 +0.3 -0.0 -0.3 -0.4
phage 36hr PHYTO6 MOI 10 -0.5 +0.2 -0.5 -0.0 +0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +0.4 +0.1 +0.3 -0.7
phage 24hr PHYTO1 MOI 10 +0.1 -0.2 -0.4 +0.2 +0.7
phage 24hr PHYTO11 MOI 1 +0.1 +0.3 -0.7 +0.2 +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +0.2 -0.2 +0.7 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.2 +0.3 +0.5 -0.4 +1.1
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