Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

Group	Condition	BPHYT_RS21230	BPHYT_RS21235	BPHYT_RS21240	BPHYT_RS21245	BPHYT_RS21250
carbon source	L-Fucose (C)	-0.4	-0.6	-0.8	-0.0	-0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	-0.1	-0.8	-0.4	-0.4	+0.4
phage	24hr PHYTO2 MOI 1	-0.2	-1.0	-0.1	-0.2	+0.6
phage	24hr PHYTO7 MOI 1	+0.0	-1.1	-0.1	-0.2	+0.5
phage	36hr PHYTO1 MOI 1	-0.0	-1.3	+0.1	-0.1	+0.5
carbon source	D-Xylose (C)	-0.6	+0.4	-0.7	+0.1	+0.1
phage	36hr PHYTO7 MOI 0.1	-0.3	-0.8	+0.2	-0.1	+0.6
phage	36hr PHYTO10 MOI 1	-0.3	-1.0	+0.1	+0.1	+0.7
carbon source	Xylitol (C)	-0.4	+1.0	-0.4	-0.1	-0.4
in planta	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1	+0.3	-1.1	+0.9	-0.0	+0.3
motility	inner cut, LB soft agar motility assay	-0.0	+0.9	+0.3	-0.7	-0.0
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB	-0.5	+0.9	+0.4	-0.3	-0.1
nitrogen source	L-Lysine (N)	+0.5	+0.7	-0.2	-0.3	-0.3
motility	outer cut, LB soft agar motility assay	+0.2	+0.6	+0.6	-0.9	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4	+0.9	+0.1	-0.5	+0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	+0.7	+0.2	-0.5	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days	+0.3	-0.4	+0.5	-0.1	+0.9
motility	inner cut, LB soft agar motility assay	-0.1	+0.7	+0.3	-0.3	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.2	+0.9	+0.0	-0.2	+0.6
carbon source	Gly-Glu (C)	-0.1	+0.8	+0.6	-0.4	+0.1
motility	outer cut, LB soft agar motility assay	+0.3	+1.0	+0.4	-0.5	+0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.7	+0.3	-0.4	+0.1	+0.5
carbon source	D-Glucosamine Hydrochloride (C)	+0.0	+0.7	+0.6	-0.3	+0.3
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.2	+1.0	+0.9	-0.4	+0.2
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8	+0.3	+0.4	-0.3	+0.3
motility	outer cut, LB soft agar motility assay	+0.4	+0.5	+0.5	-0.2	+0.5
stress	Paraquat dichloride 0.064 mg/ml	-0.0	+0.9	+0.7	-0.1	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.6	-0.0	-0.1	+0.3	+1.1
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	+0.4	+0.8	+1.2	-0.6	+0.4
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.4	+1.2	+1.1	-0.5	+0.7