Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS19930 and BPHYT_RS19935 are separated by 24 nucleotidesBPHYT_RS19935 and BPHYT_RS19940 are separated by 5 nucleotidesBPHYT_RS19940 and BPHYT_RS19945 are separated by 470 nucleotidesBPHYT_RS19945 and BPHYT_RS19950 are separated by 67 nucleotides BPHYT_RS19930: BPHYT_RS19930 - transcriptional regulator, at 17,606 to 18,961 _RS19930 BPHYT_RS19935: BPHYT_RS19935 - protein serine/threonine phosphatase, at 18,986 to 19,756 _RS19935 BPHYT_RS19940: BPHYT_RS19940 - hypothetical protein, at 19,762 to 20,049 _RS19940 BPHYT_RS19945: BPHYT_RS19945 - hypothetical protein, at 20,520 to 21,017 _RS19945 BPHYT_RS19950: BPHYT_RS19950 - hypothetical protein, at 21,085 to 21,342 _RS19950
Group Condition BPHYT_RS19930 BPHYT_RS19935 BPHYT_RS19940 BPHYT_RS19945 BPHYT_RS19950
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.4 -0.2 +0.1 -2.4 -0.3
phage 36hr PHYTO8 MOI 10 -0.8 +0.4 +0.4 -1.8 -0.6
phage 36hr PHYTO6 MOI 10 -0.7 +0.1 +0.3 -1.9 -0.2
phage 24hr PHYTO3 MOI 1 -1.2 +0.5 +0.2 -1.4 -0.3
phage 36hr PHYTO1 MOI 1 -0.8 +0.3 -0.2 -1.4 +0.1
phage 24hr PHYTO2 MOI 0.1 -0.4 +0.3 +0.0 -0.9 -0.8
phage 36hr PHYTO2 MOI 1 -0.9 +0.5 +0.3 -2.0 +0.2
phage 36hr PHYTO10 MOI 1 -0.4 -0.2 +0.5 -1.2 -0.4
phage 36hr PHYTO8 MOI 0.1 -0.7 +0.1 +0.5 -1.0 -0.5
phage 36hr PHYTO11 MOI 1 -0.6 -0.5 +0.4 -0.9 +0.2
phage 36hr PHYTO6 MOI 1 -0.0 +0.6 +0.0 -1.7 -0.3
phage 36hr PHYTO1 MOI 1 -0.6 +0.5 +0.4 -1.7 +0.2
phage 36hr PHYTO MOI 0.1 -0.6 +0.5 +0.4 -1.2 -0.1
phage 36hr PHYTO1 MOI 10 -0.8 +0.3 +0.5 -0.6 -0.3
phage 36hr PHYTO10 MOI 10 -1.4 +0.2 +0.7 +0.1 -0.5
phage 36hr PHYTO7 MOI 1 -0.3 +0.4 +0.5 -1.3 -0.3
phage 24hr PHYTO6 MOI 0.1 -0.7 +0.3 +0.4 -0.9 +0.2
phage 36hr PHYTO2 MOI 1 -0.9 +0.7 +0.6 -0.4 -0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.7 +0.2 +0.5 -0.6 +0.4
phage 24hr PHYTO MOI 0.1 +0.5 +0.1 +1.0 -1.6 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +1.0 -0.3 -0.8 -0.2
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.0 -0.6 -0.4 -0.2
phage 24hr PHYTO7 MOI 1 -0.4 +0.3 -0.3 +1.0 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.2 +1.2 -0.6 -0.4 +0.1
phage 36hr PHYTO3 MOI 0.1 -0.7 +0.6 +0.8 -0.3 +0.2
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.3 +0.4 +0.7 +0.7 -0.7
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.7 -0.3 -0.5 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 +0.4 +1.1 -0.2 +0.6
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +0.4 -0.4 +0.4 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +0.4 +0.4 +1.5 -0.2
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