Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

Group	Condition	BPHYT_RS19660	BPHYT_RS19665	BPHYT_RS19670	BPHYT_RS19675	BPHYT_RS19680
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	+0.1	-0.5	-0.2	-1.0	-3.9
in planta	Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10	-0.3	-0.0	-0.0	-0.3	-4.5
nitrogen source	L-Lysine (N)	+0.0	-1.0	-0.3	-0.4	-2.3
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-1.7	-0.2	-0.3	-0.6	-1.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-0.2	-0.4	-0.3	-0.4	-2.7
supernatant control	Vogels_fungal_media; pH 5.5	-1.0	-0.3	+0.1	-0.9	-1.3
nitrogen source	L-Asparagine (N)	-0.7	-0.5	-0.3	-0.2	-1.7
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days	-0.6	-0.2	-0.0	-0.5	-2.1
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days	-0.4	-0.4	-0.2	-0.4	-2.1
in planta	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1	+0.0	+0.3	+0.2	-0.5	-3.2
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	+0.2	-0.3	-0.3	-0.0	-2.7
stress	Benzethonium chloride 0.0016 mM	-0.3	-0.5	-0.1	-0.3	-1.8
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-1.4	-0.3	+0.1	+0.3	-1.7
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	-0.2	-0.7	-0.1	-0.1	-1.9
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	-0.1	-0.5	-0.1	-0.3	-1.9
vitamin	No vitamins t2	-0.9	-0.4	-0.2	-0.1	-1.1
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	+0.4	-0.5	-0.1	-0.5	-2.1
carbon source	2-Deoxy-D-ribonic lithium salt (C)	-0.5	-0.3	+0.1	-0.7	-1.3
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-1.0	-0.2	-0.0	+0.2	-1.4
vitamin	With vitamins t2	-1.2	-0.4	-0.2	+0.5	-1.0
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-0.4	-0.2	-0.1	+0.3	-1.9
phage	24hr PHYTO10 MOI 10	-1.9	-0.4	-0.1	-0.0	+0.3
phage	24hr PHYTO3 MOI 10	-1.8	+0.2	-0.1	-0.7	+0.7
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.9	-0.3	+0.3	+0.4	+0.0
phage	P. phyto PHYTO2 MOI 1	-0.9	-0.4	-0.2	-0.6	+0.8
phage	36hr PHYTO8 MOI 0.1	-2.1	-0.0	-0.1	+0.6	+0.4
phage	P. phyto PHYTO2 MOI 0.1	-1.6	+0.2	-0.2	-0.3	+0.7
phage	24hr PHYTO2 MOI 0.1	-1.9	+0.0	+0.1	+0.3	+0.5
phage	P. phyto PHYTO2 MOI 1	+0.2	-0.4	-0.1	-1.2	+0.9
stress	Paraquat dichloride 0.064 mg/ml	-0.3	+0.1	+0.1	-0.6	+3.6