Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

Group	Condition	BPHYT_RS17685	BPHYT_RS17690	BPHYT_RS17695	BPHYT_RS17700	BPHYT_RS17705
in planta	Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10	-7.9	-8.3	-0.7	-3.7	-0.3
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	-7.5	-8.2	-0.9	-4.0	-0.0
nitrogen source	L-Alanine (N)	-7.1	-7.4	-0.7	-4.9	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	-7.8	-8.0	-0.0	-3.8	+0.1
nitrogen source	Ammonium chloride (N)	-6.8	-7.4	-0.3	-4.7	-0.2
carbon source	pyruvate (C)	-7.8	-5.8	-0.8	-4.9	-0.0
carbon source	L-Phenylalanine (C)	-7.6	-6.9	-0.3	-3.9	-0.2
nitrogen source	L-Asparagine (N)	-7.2	-7.2	-0.1	-3.7	-0.3
carbon source	L-Malic (C)	-8.3	-5.5	-0.5	-3.8	-0.3
carbon source	NAG (C)	-7.3	-5.9	-0.4	-4.6	-0.1
nitrogen source	D-Alanine (N)	-6.3	-7.4	-0.4	-3.9	-0.1
nitrogen source	Uridine (N)	-6.2	-6.6	-0.0	-4.9	-0.0
nutrient	L-Serine	-6.6	-6.7	-0.6	-3.6	-0.1
carbon source	L-Proline (C)	-7.9	-6.3	-0.3	-3.0	-0.0
carbon source	D,L-Lactate (C)	-6.5	-6.1	-0.3	-4.6	-0.1
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-6.4	-7.2	-0.0	-3.8	-0.0
nitrogen source	L-Glutamine (N)	-7.0	-6.5	-0.6	-3.3	-0.1
carbon source	D-Galactose (C)	-5.7	-6.7	-0.4	-4.5	-0.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-5.9	-7.5	-0.0	-4.0	-0.0
carbon source	Putrescine (C)	-6.7	-5.9	-0.7	-4.2	-0.0
carbon source	L-Lactate (C)	-7.0	-6.9	-0.7	-2.7	-0.1
nitrogen source	L-Citrulline (N)	-5.7	-7.2	-0.5	-3.6	-0.3
carbon source	L-Rhamnose (C)	-6.3	-6.2	-0.5	-4.3	-0.1
pH	LB, pH4	-6.0	-7.7	+0.1	-3.8	+0.0
nitrogen source	L-Phenylalanine (N)	-5.9	-6.4	+0.0	-5.0	+0.0
pH	LB, pH4	-6.9	-6.3	-0.1	-3.9	-0.1
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-6.4	-7.2	-0.3	-3.5	+0.2
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-6.8	-6.7	-0.1	-3.6	+0.1
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-5.7	-6.6	-0.3	-4.6	+0.2
carbon source	Tween 20 (C)	-6.4	-5.8	+0.2	-5.0	+0.3