Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS17615 and BPHYT_RS17620 are separated by 95 nucleotidesBPHYT_RS17620 and BPHYT_RS17625 are separated by 21 nucleotidesBPHYT_RS17625 and BPHYT_RS17630 overlap by 1 nucleotidesBPHYT_RS17630 and BPHYT_RS17635 are separated by 255 nucleotides BPHYT_RS17615: BPHYT_RS17615 - Glutathione S-transferase domain, at 3,986,015 to 3,986,626 _RS17615 BPHYT_RS17620: BPHYT_RS17620 - cytochrome C, at 3,986,722 to 3,987,477 _RS17620 BPHYT_RS17625: BPHYT_RS17625 - cytochrome B, at 3,987,499 to 3,988,878 _RS17625 BPHYT_RS17630: BPHYT_RS17630 - ubiquinol-cytochrome C reductase, at 3,988,878 to 3,989,498 _RS17630 BPHYT_RS17635: BPHYT_RS17635 - metal-binding protein, at 3,989,754 to 3,990,500 _RS17635
Group Condition BPHYT_RS17615 BPHYT_RS17620 BPHYT_RS17625 BPHYT_RS17630 BPHYT_RS17635
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. -5.0 -3.9 -5.1 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. -5.1 -4.3 -4.0 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. -5.0 -3.9 -3.9 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. -5.2 -3.8 -3.8 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. -5.2 -3.7 -3.9 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -5.0 -3.7 -4.1 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. -4.6 -4.6 -3.0 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. -4.6 -4.0 -4.2 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. -4.0 -4.3 -3.5 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. -3.9 -4.2 -3.7 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -3.8 -3.7 -4.6 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. -4.0 -4.3 -3.6 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. -4.5 -4.1 -3.0 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -4.0 -4.2 -3.2 -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -4.4 -4.0 -3.2 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. -4.1 -3.7 -3.7 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -3.7 -4.0 -4.3 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. -2.9 -4.1 -4.2 -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. -4.0 -3.7 -3.5 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. -3.3 -3.5 -3.8 -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -4.0 -3.4 -3.0 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -1.7 -1.9 -2.5 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -2.2 -2.0 -1.7 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -2.3 -2.1 -1.6 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -1.6 -1.6 -2.4 -0.6
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 N.D. -2.5 -1.6 -1.7 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -1.6 -1.7 -1.5 -0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -1.4 -1.3 -1.6 -1.1
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -1.1 -2.0 -2.4 +0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -1.8 -1.8 -1.6 -0.0
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