Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS17610 and BPHYT_RS17615 are separated by 70 nucleotidesBPHYT_RS17615 and BPHYT_RS17620 are separated by 95 nucleotidesBPHYT_RS17620 and BPHYT_RS17625 are separated by 21 nucleotidesBPHYT_RS17625 and BPHYT_RS17630 overlap by 1 nucleotides BPHYT_RS17610: BPHYT_RS17610 - peptidase, at 3,985,435 to 3,985,944 _RS17610 BPHYT_RS17615: BPHYT_RS17615 - Glutathione S-transferase domain, at 3,986,015 to 3,986,626 _RS17615 BPHYT_RS17620: BPHYT_RS17620 - cytochrome C, at 3,986,722 to 3,987,477 _RS17620 BPHYT_RS17625: BPHYT_RS17625 - cytochrome B, at 3,987,499 to 3,988,878 _RS17625 BPHYT_RS17630: BPHYT_RS17630 - ubiquinol-cytochrome C reductase, at 3,988,878 to 3,989,498 _RS17630
Group Condition BPHYT_RS17610 BPHYT_RS17615 BPHYT_RS17620 BPHYT_RS17625 BPHYT_RS17630
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -5.0 -3.9 -5.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. -5.1 -4.3 -4.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. -5.2 -3.7 -3.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -4.6 -4.0 -4.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. -5.2 -3.8 -3.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -5.0 -3.7 -4.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -5.0 -3.9 -3.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. -4.6 -4.6 -3.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -3.8 -3.7 -4.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -3.7 -4.0 -4.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. -4.0 -4.3 -3.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. -3.9 -4.2 -3.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -4.0 -4.3 -3.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -4.4 -4.0 -3.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -4.5 -4.1 -3.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. -4.1 -3.7 -3.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -4.0 -4.2 -3.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. -4.0 -3.7 -3.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -2.9 -4.1 -4.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. -3.3 -3.5 -3.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -4.0 -3.4 -3.0
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -1.7 -1.9 -2.5
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -2.3 -2.1 -1.6
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -2.2 -2.0 -1.7
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 N.D. N.D. -2.5 -1.6 -1.7
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -1.1 -2.0 -2.4
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -1.6 -1.6 -2.4
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -1.8 -1.8 -1.6
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -1.9 -1.8 -1.4
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -1.6 -1.7 -1.5
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