Fitness for 5 genes in Burkholderia phytofirmans PsJN

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

500 ntBPHYT_RS16250 and BPHYT_RS16255 are separated by 231 nucleotidesBPHYT_RS16255 and BPHYT_RS16260 are separated by 132 nucleotidesBPHYT_RS16260 and BPHYT_RS16265 are separated by 280 nucleotidesBPHYT_RS16265 and BPHYT_RS16270 are separated by 460 nucleotides BPHYT_RS16250: BPHYT_RS16250 - N5-carboxyaminoimidazole ribonucleotide mutase, at 3,689,372 to 3,689,890 _RS16250 BPHYT_RS16255: BPHYT_RS16255 - phosphoribosylaminoimidazole-succinocarboxamide synthase, at 3,690,122 to 3,691,012 _RS16255 BPHYT_RS16260: BPHYT_RS16260 - fructose-bisphosphate aldolase, at 3,691,145 to 3,692,209 _RS16260 BPHYT_RS16265: BPHYT_RS16265 - hypothetical protein, at 3,692,490 to 3,693,926 _RS16265 BPHYT_RS16270: BPHYT_RS16270 - phosphoglycerate kinase, at 3,694,387 to 3,695,580 _RS16270
Group Condition BPHYT_RS16250 BPHYT_RS16255 BPHYT_RS16260 BPHYT_RS16265 BPHYT_RS16270
carbon source L-Malic (C) -1.3 -4.7 N.D. -0.3 -8.2
carbon source L-Phenylalanine (C) -1.4 -4.5 N.D. +0.1 -8.0
carbon source Putrescine (C) -0.3 -5.0 N.D. +0.1 -8.3
carbon source pyruvate (C) -0.6 -4.4 N.D. -0.2 -8.4
carbon source L-Proline (C) -0.5 -4.8 N.D. -0.0 -8.2
carbon source L-Histidine (C) -0.4 -4.4 N.D. +0.1 -8.3
carbon source D-Glucose (C) -0.6 -4.5 N.D. -0.0 -7.9
carbon source L-Lactate (C) -1.3 -4.8 N.D. +0.3 -6.9
carbon source Sebacic (C) -1.0 -4.3 N.D. +0.2 -7.5
carbon source L-Rhamnose (C) -1.2 -5.1 N.D. -0.1 -6.1
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.6 -4.2 N.D. -0.1 -7.5
carbon source L-Alanine (C) +0.6 -4.7 N.D. -0.2 -8.0
carbon source D-Glucosamine Hydrochloride (C) -0.1 -4.5 N.D. +0.6 -8.3
carbon source D-Lactate (C) -0.2 -5.0 N.D. -0.1 -6.9
nitrogen source L-Citrulline (N) +0.3 -4.4 N.D. -0.1 -7.9
carbon source Tween 20 (C) -0.9 -4.1 N.D. +1.1 -7.8
carbon source D-Sorbitol (C) -0.5 -4.8 N.D. -0.4 -6.1
carbon source Phenylacetic 5 mM (C) -1.7 -4.1 N.D. -0.8 -5.2
carbon source L-Tryptophan (C) -0.4 -4.8 N.D. +0.3 -6.8
carbon source L-Fucose (C) -2.1 -3.5 N.D. +0.6 -6.6
carbon source D,L-Lactate (C) -0.9 -4.4 N.D. +0.5 -6.7
nutrient L-Serine -0.5 -4.7 N.D. -0.5 -5.9
carbon source L-Glutamine (C) -1.2 -4.0 N.D. +0.3 -6.3
nitrogen source L-Asparagine (N) +0.3 -4.5 N.D. -0.3 -6.5
carbon source D-Alanine (C) +0.0 -4.2 N.D. +0.1 -6.9
carbon source D-Glucose (C) +0.5 -3.7 N.D. -0.3 -7.2
nitrogen source L-Serine (N) -4.1 -4.4 N.D. +0.7 -2.6
nitrogen source Ammonium chloride (N) +1.4 -4.4 N.D. -0.2 -5.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.5 -3.7 N.D. -0.2 -6.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 -2.5 N.D. +1.4 -6.8
remove
BPHYT_RS16250
plot		 remove
BPHYT_RS16255
plot		 remove
BPHYT_RS16260		 remove
BPHYT_RS16265
plot		 remove
BPHYT_RS16270
plot