Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS15855 and BPHYT_RS15860 are separated by 391 nucleotidesBPHYT_RS15860 and BPHYT_RS15865 are separated by 219 nucleotidesBPHYT_RS15865 and BPHYT_RS15870 are separated by 566 nucleotidesBPHYT_RS15870 and BPHYT_RS15875 overlap by 20 nucleotides BPHYT_RS15855: BPHYT_RS15855 - hypothetical protein, at 3,600,772 to 3,601,347 _RS15855 BPHYT_RS15860: BPHYT_RS15860 - superoxide dismutase, at 3,601,739 to 3,602,317 _RS15860 BPHYT_RS15865: BPHYT_RS15865 - exodeoxyribonuclease VII large subunit, at 3,602,537 to 3,603,916 _RS15865 BPHYT_RS15870: BPHYT_RS15870 - tetraacyldisaccharide 4'-kinase, at 3,604,483 to 3,605,499 _RS15870 BPHYT_RS15875: BPHYT_RS15875 - hypothetical protein, at 3,605,480 to 3,605,683 _RS15875
Group Condition BPHYT_RS15855 BPHYT_RS15860 BPHYT_RS15865 BPHYT_RS15870 BPHYT_RS15875
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3 N.D. -1.3 N.D. N.D.
stress Lomefloxacin 0.001 mM +0.0 N.D. -1.5 N.D. N.D.
phage 24hr PHYTO1 MOI 10 -0.7 N.D. -0.8 N.D. N.D.
carbon source L-Phenylalanine (C) -0.1 N.D. -1.3 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.2 N.D. -1.2 N.D. N.D.
carbon source Suberic (C) -0.1 N.D. -1.3 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.0 N.D. -1.4 N.D. N.D.
nitrogen source D-Alanine (N) -0.2 N.D. -1.1 N.D. N.D.
carbon source pyruvate (C) -0.3 N.D. -0.9 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.1 N.D. -1.0 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.2 N.D. -1.1 N.D. N.D.
carbon source Azelaic (C) +0.3 N.D. -1.1 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 N.D. -1.0 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 N.D. -0.8 N.D. N.D.
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.8 N.D. -1.0 N.D. N.D.
phage 36hr PHYTO10 MOI 10 -0.6 N.D. +0.5 N.D. N.D.
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.7 N.D. -0.7 N.D. N.D.
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.7 N.D. -0.7 N.D. N.D.
nophagecontrol 24hr Phyto Lib Only -0.5 N.D. +0.7 N.D. N.D.
phage 36hr PHYTO MOI 0.1 -0.5 N.D. +0.7 N.D. N.D.
phage 24hr PHYTO4 MOI 10 -0.4 N.D. +0.8 N.D. N.D.
nophagecontrol 36hr Phyto Lib only -0.4 N.D. +0.8 N.D. N.D.
phage 36hr PHYTO7 MOI 1 -0.3 N.D. +0.8 N.D. N.D.
phage 36hr PHYTO1 MOI 1 -0.3 N.D. +0.9 N.D. N.D.
phage 36hr PHYTO4 MOI 0.1 -0.2 N.D. +0.9 N.D. N.D.
phage 36hr PHYTO2 MOI 1 -0.3 N.D. +1.0 N.D. N.D.
phage 24hr PHYTO4 MOI 0.1 -0.3 N.D. +1.1 N.D. N.D.
phage 36hr PHYTO7 MOI 0.1 -0.2 N.D. +1.2 N.D. N.D.
phage 24hr PHYTO7 MOI 1 -0.1 N.D. +1.0 N.D. N.D.
phage 36hr PHYTO8 MOI 10 +0.1 N.D. +1.0 N.D. N.D.
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BPHYT_RS15860
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