Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS15670 and BPHYT_RS15675 are separated by 117 nucleotidesBPHYT_RS15675 and BPHYT_RS15680 are separated by 172 nucleotidesBPHYT_RS15680 and BPHYT_RS15685 overlap by 1 nucleotidesBPHYT_RS15685 and BPHYT_RS15690 are separated by 111 nucleotides BPHYT_RS15670: BPHYT_RS15670 - phosphoribosylglycinamide formyltransferase, at 3,553,725 to 3,554,378 _RS15670 BPHYT_RS15675: BPHYT_RS15675 - riboflavin kinase, at 3,554,496 to 3,555,491 _RS15675 BPHYT_RS15680: BPHYT_RS15680 - isoleucine--tRNA ligase, at 3,555,664 to 3,558,501 _RS15680 BPHYT_RS15685: BPHYT_RS15685 - lipoprotein signal peptidase, at 3,558,501 to 3,559,019 _RS15685 BPHYT_RS15690: BPHYT_RS15690 - phosphopantothenate synthase, at 3,559,131 to 3,560,345 _RS15690
Group Condition BPHYT_RS15670 BPHYT_RS15675 BPHYT_RS15680 BPHYT_RS15685 BPHYT_RS15690
carbon source Tween 20 (C) -5.3 N.D. N.D. N.D. N.D.
nitrogen source L-Asparagine (N) -5.2 N.D. N.D. N.D. N.D.
vitamin With vitamins t2 -4.8 N.D. N.D. N.D. N.D.
nitrogen source L-Glutamine (N) -4.6 N.D. N.D. N.D. N.D.
nitrogen source L-Proline (N) -4.1 N.D. N.D. N.D. N.D.
vitamin No vitamins t2 -4.0 N.D. N.D. N.D. N.D.
carbon source L-Proline (C) -3.6 N.D. N.D. N.D. N.D.
nitrogen source L-Glutamic (N) -3.4 N.D. N.D. N.D. N.D.
nitrogen source Ammonium chloride (N) -3.4 N.D. N.D. N.D. N.D.
carbon source Azelaic (C) -3.3 N.D. N.D. N.D. N.D.
carbon source Sebacic (C) -3.2 N.D. N.D. N.D. N.D.
carbon source Phenylacetic 5 mM (C) -3.2 N.D. N.D. N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -3.2 N.D. N.D. N.D. N.D.
carbon source Protocatechuic Acid (C) -3.0 N.D. N.D. N.D. N.D.
carbon source Dodecandioic (C) -3.0 N.D. N.D. N.D. N.D.
carbon source succinate (C) -3.0 N.D. N.D. N.D. N.D.
carbon source Sebacic (C) -3.0 N.D. N.D. N.D. N.D.
carbon source Protocatechuic Acid (C) -2.8 N.D. N.D. N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -2.8 N.D. N.D. N.D. N.D.
carbon source Phenylacetic 5 mM (C) -2.7 N.D. N.D. N.D. N.D.
carbon source D-Glucose (C) -2.6 N.D. N.D. N.D. N.D.
carbon source L-Malic (C) -2.6 N.D. N.D. N.D. N.D.
carbon source Xylitol (C) -2.4 N.D. N.D. N.D. N.D.
carbon source D,L-Lactate (C) -2.4 N.D. N.D. N.D. N.D.
nutrient casaminos -2.4 N.D. N.D. N.D. N.D.
carbon source D-Galacturonic Acid (C) -2.4 N.D. N.D. N.D. N.D.
nutrient casaminos -2.4 N.D. N.D. N.D. N.D.
nitrogen source L-Citrulline (N) -2.4 N.D. N.D. N.D. N.D.
carbon source D-Xylose (C) -2.3 N.D. N.D. N.D. N.D.
carbon source L-Lactate (C) -2.3 N.D. N.D. N.D. N.D.
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