Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS15500	BPHYT_RS15505	BPHYT_RS15510	BPHYT_RS15515	BPHYT_RS15520
phage	36hr PHYTO2 MOI 1	-0.2	-0.1	-0.1	-1.0	-0.3
phage	24hr PHYTO6 MOI 1	-0.1	-0.3	-0.2	-0.9	+0.0
phage	36hr PHYTO7 MOI 1	+0.0	-0.0	-0.1	-1.2	+0.0
phage	24hr PHYTO4 MOI 10	-0.4	-0.1	+0.1	-0.6	-0.2
phage	24hr PHYTO10 MOI 10	+0.1	+0.2	-0.1	-1.0	-0.3
phage	P. phyto corn MOI 0.1	+0.1	+0.1	-0.2	-0.4	-0.6
phage	36hr PHYTO MOI 0.1	-0.1	-0.1	+0.2	-0.8	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.4	+0.2	+0.0	-0.4	-0.3
phage	24hr PHYTO3 MOI 10	+0.2	-0.2	+0.0	-0.9	+0.1
phage	24hr PHYTO6 MOI 0.1	+0.1	-0.6	+0.2	-0.2	-0.3
phage	24hr PHYTO2 MOI 1	-0.3	-0.1	+0.3	-0.7	+0.0
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-0.0	+0.2	+0.2	-0.7	-0.3
phage	36hr PHYTO2 MOI 0.1	-0.1	-0.2	+0.4	-0.7	-0.1
phage	36hr PHYTO4 MOI 1	-0.3	+0.2	+0.2	-0.5	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6	+0.0	+0.1	-0.4	+0.4
nitrogen source	L-Glutamic (N)	+0.1	+0.2	+0.3	-0.9	-0.1
phage	36hr PHYTO3 MOI 1	+0.1	+0.2	+0.3	-0.9	+0.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	+0.2	-0.0	-0.6	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4	+0.3	+0.0	-0.4	+0.2
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	+0.2	+0.4	+0.1	-0.4	-0.3
carbon source	propionate (C)	+0.3	+0.4	-0.1	-0.6	+0.1
lb_dap plate control	LB_DAP agar plate, outgrowth in LB	-0.3	-0.2	+0.1	+0.5	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.2	-0.0	-0.0	+0.9	-0.3
carbon source	Phenylacetic 5 mM (C)	-0.7	+0.1	+0.1	+0.8	+0.3
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	-0.0	+0.5	-0.2	+0.6	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.3	+0.4	+0.3	-0.0	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	-0.2	-0.1	+0.9	+0.2
carbon source	L-Tryptophan (C)	-0.3	+0.2	-0.1	+0.6	+0.4
carbon source	D-Galacturonic Acid (C)	+0.3	-0.1	-0.1	+0.9	+0.2
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.1	+0.2	-0.0	+1.9	-0.1