Fitness for 5 genes in Burkholderia phytofirmans PsJN

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

500 ntBPHYT_RS15260 and BPHYT_RS15265 are separated by 129 nucleotidesBPHYT_RS15265 and BPHYT_RS15270 are separated by 352 nucleotidesBPHYT_RS15270 and BPHYT_RS15275 are separated by 415 nucleotidesBPHYT_RS15275 and BPHYT_RS15280 are separated by 530 nucleotides BPHYT_RS15260: BPHYT_RS15260 - chorismate mutase, at 3,470,015 to 3,470,611 _RS15260 BPHYT_RS15265: BPHYT_RS15265 - DNA polymerase III subunit epsilon, at 3,470,741 to 3,471,892 _RS15265 BPHYT_RS15270: BPHYT_RS15270 - cold-shock protein, at 3,472,245 to 3,472,448 _RS15270 BPHYT_RS15275: BPHYT_RS15275 - hypothetical protein, at 3,472,864 to 3,473,112 _RS15275 BPHYT_RS15280: BPHYT_RS15280 - porin, at 3,473,643 to 3,474,788 _RS15280
Group Condition BPHYT_RS15260 BPHYT_RS15265 BPHYT_RS15270 BPHYT_RS15275 BPHYT_RS15280
phage 24hr PHYTO1 MOI 10 -0.5 -0.1 N.D. -0.1 -1.4
phage 24hr PHYTO11 MOI 0.1 -1.0 -0.1 N.D. -0.4 -0.7
phage P. phyto corn MOI 1 -1.0 -0.3 N.D. -0.5 -0.2
phage 24hr PHYTO9 MOI 10 -0.3 +0.2 N.D. -0.6 -1.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 +0.1 N.D. -0.4 -0.6
phage PHYTO3 MOI 0.1 -0.7 -0.3 N.D. +0.2 -0.7
phage 36hr PHYTO10 MOI 10 -0.6 -0.1 N.D. +0.2 -0.9
phage 24hr PHYTO1 MOI 10 -0.8 -0.0 N.D. +0.1 -0.8
phage 24hr PHYTO MOI 0.1 -0.9 -0.2 N.D. +0.3 -0.5
phage 36hr PHYTO2 MOI 1 -1.2 +0.1 N.D. +0.1 -0.3
phage 24hr PHYTO3 MOI 10 -1.4 -0.2 N.D. +0.2 +0.1
phage 36hr PHYTO11 MOI 1 -0.7 +0.0 N.D. +0.2 -0.8
phage 36hr PHYTO11 MOI 0.1 -0.7 +0.1 N.D. +0.3 -0.9
phage 36hr PHYTO6 MOI 0.1 -0.0 +0.1 N.D. +0.2 -1.3
nophagecontrol 36hr Phyto Lib only -0.3 -0.1 N.D. +0.4 -1.0
phage P. phyto PHYTO2 MOI 1 -1.0 -0.3 N.D. -0.1 +0.4
phage 36hr PHYTO6 MOI 0.1 +0.5 -0.2 N.D. +0.1 -1.3
nitrogen source L-Lysine (N) +0.7 +0.3 N.D. -1.2 -0.5
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.5 +0.1 N.D. +0.6 -0.9
phage 36hr PHYTO6 MOI 10 +0.6 -0.3 N.D. +0.2 -1.0
phage 36hr PHYTO8 MOI 10 +0.5 -0.1 N.D. +0.2 -1.1
phage 36hr PHYTO1 MOI 1 +0.8 -0.8 N.D. +0.2 -0.4
carbon source Phenylacetic 5 mM (C) +0.5 -0.2 N.D. +0.7 -1.1
stress Bacitracin 0.25 mg/ml +0.4 +0.1 N.D. +0.4 -1.0
phage 36hr PHYTO11 MOI 1 +0.8 -0.1 N.D. +0.2 -0.7
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +1.1 -0.3 N.D. +0.1 -0.6
carbon source Phenylacetic 5 mM (C) +0.1 +0.2 N.D. +0.7 -0.6
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +1.1 +0.1 N.D. -0.2 -0.5
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.0 +0.4 N.D. +1.1 -0.5
carbon source D-Glucose 20 mM (C) +1.0 +0.1 N.D. +0.4 -0.2
remove
BPHYT_RS15260
plot		 remove
BPHYT_RS15265
plot		 remove
BPHYT_RS15270		 remove
BPHYT_RS15275
plot		 remove
BPHYT_RS15280
plot