Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS15240 and BPHYT_RS15245 are separated by 106 nucleotidesBPHYT_RS15245 and BPHYT_RS15250 overlap by 4 nucleotidesBPHYT_RS15250 and BPHYT_RS15255 are separated by 590 nucleotidesBPHYT_RS15255 and BPHYT_RS15260 are separated by 272 nucleotides BPHYT_RS15240: BPHYT_RS15240 - excinuclease ABC subunit A, at 3,465,076 to 3,467,760 _RS15240 BPHYT_RS15245: BPHYT_RS15245 - transposase, at 3,467,867 to 3,468,703 _RS15245 BPHYT_RS15250: BPHYT_RS15250 - transposase, at 3,468,700 to 3,469,002 _RS15250 BPHYT_RS15255: BPHYT_RS15255 - hypothetical protein, at 3,469,593 to 3,469,742 _RS15255 BPHYT_RS15260: BPHYT_RS15260 - chorismate mutase, at 3,470,015 to 3,470,611 _RS15260
Group Condition BPHYT_RS15240 BPHYT_RS15245 BPHYT_RS15250 BPHYT_RS15255 BPHYT_RS15260
phage 24hr PHYTO3 MOI 10 +0.1 N.D. N.D. N.D. -1.4
phage 36hr PHYTO2 MOI 1 -0.1 N.D. N.D. N.D. -1.2
phage P. phyto PHYTO2 MOI 1 -0.1 N.D. N.D. N.D. -1.0
phage P. phyto corn MOI 1 -0.1 N.D. N.D. N.D. -1.0
phage 24hr PHYTO MOI 0.1 -0.2 N.D. N.D. N.D. -0.9
phage 24hr PHYTO10 MOI 10 -0.2 N.D. N.D. N.D. -0.8
phage 24hr PHYTO11 MOI 0.1 +0.0 N.D. N.D. N.D. -1.0
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.1 N.D. N.D. N.D. -0.8
nophagecontrol 24hr Phyto Lib Only -0.2 N.D. N.D. N.D. -0.7
supernatant control Vogels_fungal_media 0.1X -0.0 N.D. N.D. N.D. -0.9
carbon source Tween 20 (C) -0.0 N.D. N.D. N.D. -0.9
phage 24hr PHYTO3 MOI 0.1 -0.1 N.D. N.D. N.D. -0.8
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.2 N.D. N.D. N.D. -0.9
phage PHYTO3 MOI 0.1 +0.1 N.D. N.D. N.D. -0.7
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.2 N.D. N.D. N.D. -0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 N.D. N.D. N.D. -0.7
motility outer cut, LB soft agar motility assay +0.3 N.D. N.D. N.D. -0.6
nitrogen source L-Lysine (N) -0.5 N.D. N.D. N.D. +0.7
nitrogen source L-Glutamic (N) -0.3 N.D. N.D. N.D. +0.7
phage 36hr PHYTO1 MOI 1 -0.3 N.D. N.D. N.D. +0.8
nitrogen source Ammonium chloride (N) -0.2 N.D. N.D. N.D. +0.8
phage 36hr PHYTO11 MOI 1 -0.2 N.D. N.D. N.D. +0.8
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 N.D. N.D. N.D. +0.6
carbon source D-Glucose 20 mM (C) -0.1 N.D. N.D. N.D. +1.0
phage 24hr PHYTO4 MOI 10 -0.0 N.D. N.D. N.D. +1.0
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.1 N.D. N.D. N.D. +1.1
nitrogen source L-Alanine (N) +0.0 N.D. N.D. N.D. +0.9
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.0 N.D. N.D. N.D. +1.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.2 N.D. N.D. N.D. +1.1
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +0.2 N.D. N.D. N.D. +1.4
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BPHYT_RS15240
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