Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS15190	BPHYT_RS15195	BPHYT_RS15200	BPHYT_RS15205	BPHYT_RS15210
carbon source	2-Deoxy-D-ribonic lithium salt (C)	-3.5	-0.2	-0.3	+0.1	-0.4
motility	outer cut, LB soft agar motility assay	-1.1	-0.2	-0.5	-0.2	-0.1
carbon source	Disodium Glutarate (C)	-1.7	-0.1	-0.1	-0.1	-0.0
stress	Paraquat dichloride 0.032 mg/ml	-1.9	+0.1	-0.2	+0.1	-0.2
carbon source	D-Glucose (C)	-1.5	-0.3	-0.3	-0.0	+0.1
phage	24hr PHYTO8 MOI 1	-2.2	-0.0	-0.2	+0.2	+0.2
carbon source	Phenylacetic 5 mM (C)	-0.5	-0.6	+0.0	+0.2	-1.1
in planta	Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days	-1.7	+0.2	-0.4	-0.1	-0.0
nitrogen source	L-Serine (N)	-1.3	-0.1	+0.5	-0.1	-0.1
stress	Bacitracin 0.25 mg/ml	-0.0	-0.2	-0.4	-1.0	+0.6
carbon source	Phenylacetic 5 mM (C)	+0.7	-0.6	+0.3	-0.0	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	+1.2	+0.1	-0.8	-0.1	+0.0
phage	24hr PHYTO6 MOI 1	-0.3	+0.6	+0.6	+0.3	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.7	-0.2	+0.8	-0.1	+0.3
phage	36hr PHYTO8 MOI 10	+1.3	+0.0	-0.2	+0.3	+0.2
phage	P. phyto corn MOI 1	+0.8	-0.3	+0.5	+0.4	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.9	-0.2	+0.9	+0.1	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+1.4	+0.1	+0.4	+0.1	-0.2
phage	24hr PHYTO10 MOI 10	+0.4	+0.5	+1.0	+0.4	-0.1
phage	36hr PHYTO2 MOI 1	+0.9	+0.1	+0.6	+0.3	+0.3
phage	24hr PHYTO10 MOI 10	+0.9	+0.5	+0.8	+0.2	-0.1
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	+1.7	+0.3	+0.2	+0.0	+0.2
phage	36hr PHYTO6 MOI 10	+0.7	+0.8	+1.1	+0.3	-0.1
phage	36hr PHYTO4 MOI 1	+0.8	+0.9	+1.0	+0.2	-0.0
phage	36hr PHYTO6 MOI 1	+0.8	+0.8	+1.1	+0.6	+0.0
phage	36hr PHYTO10 MOI 10	+1.3	+1.0	+1.0	+0.3	-0.2
phage	36hr PHYTO4 MOI 1	+1.7	+0.8	+0.6	+0.4	-0.1
phage	36hr PHYTO10 MOI 10	+2.7	+1.4	+1.2	+0.5	-0.2
phage	24hr PHYTO6 MOI 10	+1.8	+2.1	+2.5	+0.8	-0.1
phage	24hr PHYTO4 MOI 10	+3.7	+2.4	+2.6	+0.8	-0.1