Fitness for 5 genes in Burkholderia phytofirmans PsJN

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

500 ntBPHYT_RS15185 and BPHYT_RS15190 are separated by 3 nucleotidesBPHYT_RS15190 and BPHYT_RS15195 overlap by 26 nucleotidesBPHYT_RS15195 and BPHYT_RS15200 overlap by 17 nucleotidesBPHYT_RS15200 and BPHYT_RS15205 are separated by 685 nucleotides BPHYT_RS15185: BPHYT_RS15185 - acyl carrier protein, at 3,455,875 to 3,456,126 _RS15185 BPHYT_RS15190: BPHYT_RS15190 - acyl carrier protein, at 3,456,130 to 3,456,429 _RS15190 BPHYT_RS15195: BPHYT_RS15195 - glycerol acyltransferase, at 3,456,404 to 3,457,198 _RS15195 BPHYT_RS15200: BPHYT_RS15200 - hypothetical protein, at 3,457,182 to 3,457,964 _RS15200 BPHYT_RS15205: BPHYT_RS15205 - hypothetical protein, at 3,458,650 to 3,459,354 _RS15205
Group Condition BPHYT_RS15185 BPHYT_RS15190 BPHYT_RS15195 BPHYT_RS15200 BPHYT_RS15205
carbon source 2-Deoxy-D-ribonic lithium salt (C) N.D. -3.5 -0.2 -0.3 +0.1
phage 24hr PHYTO8 MOI 1 N.D. -2.2 -0.0 -0.2 +0.2
motility outer cut, LB soft agar motility assay N.D. -1.1 -0.2 -0.5 -0.2
carbon source D-Glucose (C) N.D. -1.5 -0.3 -0.3 -0.0
carbon source Disodium Glutarate (C) N.D. -1.7 -0.1 -0.1 -0.1
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days N.D. -1.7 +0.2 -0.4 -0.1
stress Paraquat dichloride 0.032 mg/ml N.D. -1.9 +0.1 -0.2 +0.1
nitrogen source L-Serine (N) N.D. -1.3 -0.1 +0.5 -0.1
phage 36hr PHYTO11 MOI 0.1 N.D. -1.1 +0.0 +0.5 +0.2
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 N.D. -0.8 -0.1 +0.8 +0.1
phage P. phyto PHYTO2 MOI 1 N.D. +0.7 +0.3 -0.8 +0.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X N.D. +1.2 +0.1 -0.8 -0.1
phage 24hr PHYTO1 MOI 10 N.D. +0.8 -0.4 +0.5 +0.1
phage 24hr PHYTO6 MOI 1 N.D. -0.3 +0.6 +0.6 +0.3
phage P. phyto corn MOI 1 N.D. +0.8 -0.3 +0.5 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.9 -0.2 +0.9 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. +1.6 +0.0 +0.2 -0.1
phage 36hr PHYTO2 MOI 1 N.D. +0.9 +0.1 +0.6 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. +1.4 +0.1 +0.4 +0.1
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days N.D. +1.7 +0.3 +0.2 +0.0
phage 24hr PHYTO10 MOI 10 N.D. +0.4 +0.5 +1.0 +0.4
phage 24hr PHYTO10 MOI 10 N.D. +0.9 +0.5 +0.8 +0.2
phage 36hr PHYTO6 MOI 10 N.D. +0.7 +0.8 +1.1 +0.3
phage 36hr PHYTO4 MOI 1 N.D. +0.8 +0.9 +1.0 +0.2
phage 36hr PHYTO6 MOI 1 N.D. +0.8 +0.8 +1.1 +0.6
phage 36hr PHYTO10 MOI 10 N.D. +1.3 +1.0 +1.0 +0.3
phage 36hr PHYTO4 MOI 1 N.D. +1.7 +0.8 +0.6 +0.4
phage 36hr PHYTO10 MOI 10 N.D. +2.7 +1.4 +1.2 +0.5
phage 24hr PHYTO6 MOI 10 N.D. +1.8 +2.1 +2.5 +0.8
phage 24hr PHYTO4 MOI 10 N.D. +3.7 +2.4 +2.6 +0.8
remove
BPHYT_RS15185
plot		 remove
BPHYT_RS15190
plot		 remove
BPHYT_RS15195		 remove
BPHYT_RS15200
plot		 remove
BPHYT_RS15205
plot