Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS15155	BPHYT_RS15160	BPHYT_RS15165	BPHYT_RS15170	BPHYT_RS15175
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.7	+0.0	-0.5	-0.3	-0.5
phage	24hr PHYTO2 MOI 1	-0.6	-0.1	-0.7	-0.3	+0.0
carbon source	Phenylacetic 5 mM (C)	-0.5	-0.1	-0.5	+0.3	-0.4
phage	24hr PHYTO MOI 0.1	+0.5	-0.3	-1.0	-0.4	-0.0
phage	36hr PHYTO7 MOI 1	+0.0	+0.4	-1.1	-0.3	+0.1
nophagecontrol	36hr Phyto Lib only	+0.4	+0.4	-1.3	-0.4	-0.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5	+0.2	-0.7	+0.3	-0.1
motility	outer cut, LB soft agar motility assay	-0.4	-0.2	-0.3	-0.3	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8	-0.0	-0.4	+0.4	+0.2
phage	24hr PHYTO3 MOI 1	+0.3	+0.4	-1.3	+0.0	+0.1
phage	24hr PHYTO3 MOI 0.1	+0.4	+0.3	-1.0	-0.3	+0.2
phage	P. phyto PHYTO2 MOI 1	-0.5	-0.5	-0.3	+0.5	+0.4
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.3	-0.6	+0.3	+0.3	+0.5
phage	P. phyto PHYTO2 MOI 0.1	+0.1	+0.3	-0.5	+0.7	-0.3
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	+1.3	-0.1	+0.4	+0.2	-0.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	+0.3	+0.2	+0.6	+0.7	-0.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	+0.5	+0.6	+0.2	+0.3	+0.3
phage	24hr PHYTO6 MOI 1	+0.4	+0.5	-0.2	+0.6	+0.5
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	+0.9	+0.1	+0.8	+0.7	+0.1
phage	24hr PHYTO10 MOI 10	+0.7	+0.7	+0.0	+0.6	+0.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	+0.9	+0.5	+0.5	+1.0	+0.1
phage	36hr PHYTO4 MOI 1	+1.0	+0.7	+0.1	+0.7	+0.9
phage	36hr PHYTO6 MOI 10	+0.8	+1.0	+0.0	+1.1	+0.7
phage	24hr PHYTO10 MOI 10	+0.9	+0.7	+0.3	+1.1	+0.9
phage	36hr PHYTO6 MOI 1	+1.0	+0.8	+0.6	+0.8	+1.0
phage	36hr PHYTO4 MOI 1	+0.5	+1.2	+0.6	+1.2	+0.9
phage	36hr PHYTO10 MOI 10	+1.0	+1.0	+1.0	+1.1	+1.3
phage	36hr PHYTO10 MOI 10	+0.9	+1.6	+0.7	+1.0	+1.3
phage	24hr PHYTO6 MOI 10	+2.4	+1.9	+1.3	+1.8	+2.0
phage	24hr PHYTO4 MOI 10	+2.4	+2.7	+2.1	+2.4	+2.5