Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

Group	Condition	BPHYT_RS15115	BPHYT_RS15120	BPHYT_RS15125	BPHYT_RS15130	BPHYT_RS15135
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.0	-0.4	-0.5	-0.5	-0.4
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-0.5	-0.8	+0.2	-0.3	+0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	+0.0	-1.1	+0.1	+0.8	+0.1
carbon source	Phenylacetic 5 mM (C)	+0.3	+1.1	-0.2	-0.6	-0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	-0.7	+0.2	+0.2	+0.8
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	+0.2	-0.5	+0.4	+0.6	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	+1.2	-0.4	-0.4	+0.0
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB	+0.4	-0.7	+0.6	+0.5	-0.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	+0.2	-0.6	+0.7	+0.4	+0.1
phage	24hr PHYTO7 MOI 1	-0.5	+0.3	+0.5	+0.2	+0.4
phage	36hr PHYTO6 MOI 10	-0.3	-0.7	+0.6	+0.8	+0.7
phage	36hr PHYTO6 MOI 1	-0.1	-0.6	+0.7	+0.6	+0.5
phage	24hr PHYTO10 MOI 10	+0.1	-0.5	+0.2	+0.6	+1.0
phage	36hr PHYTO4 MOI 1	-0.1	-0.4	+0.3	+0.7	+1.0
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	+0.6	-0.2	+0.6	+0.4	+0.1
in planta	Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10	+0.3	+0.6	+0.3	-0.1	+0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	+0.4	+0.3	+0.5	+0.3	+0.5
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	+1.1	-0.4	-0.1	+0.2	+1.1
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7	+0.6	+0.5	+0.2	-0.0
phage	36hr PHYTO10 MOI 10	-0.2	-0.5	+0.3	+1.2	+1.2
carbon source	Protocatechuic Acid (C)	+0.2	+0.7	+0.3	+0.3	+0.5
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5	+0.7	+0.3	+0.0	+0.5
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	+1.1	-0.4	-0.1	+0.4	+1.2
supernatant control	Vogels_fungal_media 0.1X	+0.7	+0.7	+0.4	+0.1	+0.3
phage	36hr PHYTO10 MOI 10	-0.5	+0.5	+0.6	+1.0	+0.7
phage	36hr PHYTO4 MOI 1	+0.0	+0.2	+0.2	+0.9	+1.2
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	+1.1	-0.7	+0.1	+0.2	+1.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.2	+2.0	+0.4	-0.0	+0.7
phage	24hr PHYTO6 MOI 10	+0.3	-0.9	+0.5	+1.8	+1.9
phage	24hr PHYTO4 MOI 10	+0.1	-0.3	+1.1	+2.3	+2.5