Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS14910 and BPHYT_RS14915 are separated by 69 nucleotidesBPHYT_RS14915 and BPHYT_RS14920 are separated by 1 nucleotidesBPHYT_RS14920 and BPHYT_RS14925 are separated by 2 nucleotidesBPHYT_RS14925 and BPHYT_RS14930 are separated by 123 nucleotides BPHYT_RS14910: BPHYT_RS14910 - chorismate mutase, at 3,390,896 to 3,391,978 _RS14910 BPHYT_RS14915: BPHYT_RS14915 - phosphoserine aminotransferase, at 3,392,048 to 3,393,130 _RS14915 BPHYT_RS14920: BPHYT_RS14920 - hypothetical protein, at 3,393,132 to 3,393,425 _RS14920 BPHYT_RS14925: BPHYT_RS14925 - hypothetical protein, at 3,393,428 to 3,394,030 _RS14925 BPHYT_RS14930: BPHYT_RS14930 - DNA gyrase subunit A, at 3,394,154 to 3,396,742 _RS14930
Group Condition BPHYT_RS14910 BPHYT_RS14915 BPHYT_RS14920 BPHYT_RS14925 BPHYT_RS14930
nitrogen source L-Glutamine (N) -7.2 -6.8 -1.1 N.D. N.D.
nitrogen source L-Asparagine (N) -7.4 -6.4 -1.1 N.D. N.D.
nitrogen source L-Glutamic (N) -6.3 -7.3 -1.0 N.D. N.D.
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -6.4 -6.9 -0.9 N.D. N.D.
nitrogen source L-Alanine (N) -6.0 -7.3 -0.9 N.D. N.D.
carbon source Tween 20 (C) -6.4 -6.8 -0.9 N.D. N.D.
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -7.3 -6.5 -0.3 N.D. N.D.
carbon source L-Rhamnose (C) -6.1 -7.5 -0.4 N.D. N.D.
nitrogen source D-Alanine (N) -6.2 -6.8 -0.8 N.D. N.D.
carbon source L-Proline (C) -6.1 -6.9 -0.9 N.D. N.D.
nitrogen source Ammonium chloride (N) -5.9 -7.3 -0.5 N.D. N.D.
carbon source NAG (C) -5.9 -6.3 -1.3 N.D. N.D.
carbon source L-Malic (C) -5.9 -6.4 -1.3 N.D. N.D.
nutrient L-Histidine -6.4 -6.0 -1.1 N.D. N.D.
supernatant control Vogels_fungal_media; pH 5.5 -4.7 -7.3 -1.2 N.D. N.D.
carbon source D-Gluconic Acid (C) -5.2 -7.4 -0.5 N.D. N.D.
carbon source L-Lactate (C) -5.4 -6.7 -0.9 N.D. N.D.
nitrogen source L-Citrulline (N) -5.4 -6.5 -1.0 N.D. N.D.
carbon source L-Glutamine (C) -6.4 -5.2 -1.3 N.D. N.D.
carbon source pyruvate (C) -6.0 -6.3 -0.5 N.D. N.D.
carbon source D,L-Lactate (C) -5.5 -6.4 -0.8 N.D. N.D.
carbon source L-Fucose (C) -4.6 -7.0 -1.1 N.D. N.D.
carbon source m-Inositol (C) -5.4 -6.8 -0.5 N.D. N.D.
carbon source succinate (C) -5.1 -6.5 -1.0 N.D. N.D.
carbon source D-Fructose (C) -4.9 -6.8 -0.9 N.D. N.D.
carbon source Protocatechuic Acid (C) -6.0 -5.4 -1.1 N.D. N.D.
nitrogen source L-Lysine (N) -5.1 -7.0 -0.3 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days -5.1 -6.1 -1.2 N.D. N.D.
supernatant control Vogels_fungal_media 0.1X -4.1 -6.5 -1.7 N.D. N.D.
carbon source D-Galactose (C) -5.9 -5.7 -0.7 N.D. N.D.
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