Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS14525 and BPHYT_RS14530 are separated by 74 nucleotidesBPHYT_RS14530 and BPHYT_RS14535 are separated by 141 nucleotidesBPHYT_RS14535 and BPHYT_RS14540 are separated by 301 nucleotidesBPHYT_RS14540 and BPHYT_RS14545 are separated by 117 nucleotides BPHYT_RS14525: BPHYT_RS14525 - sodium:proton antiporter, at 3,311,299 to 3,312,729 _RS14525 BPHYT_RS14530: BPHYT_RS14530 - membrane protein, at 3,312,804 to 3,313,466 _RS14530 BPHYT_RS14535: BPHYT_RS14535 - nicotinate phosphoribosyltransferase, at 3,313,608 to 3,314,804 _RS14535 BPHYT_RS14540: BPHYT_RS14540 - ferredoxin, at 3,315,106 to 3,315,429 _RS14540 BPHYT_RS14545: BPHYT_RS14545 - tRNA-Asn, at 3,315,547 to 3,315,622 _RS14545
Group Condition BPHYT_RS14525 BPHYT_RS14530 BPHYT_RS14535 BPHYT_RS14540 BPHYT_RS14545
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -0.5 +0.0 N.D. N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.2 -0.1 -1.3 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -0.4 -0.1 N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.4 -0.6 -0.1 N.D. N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.1 -0.1 -1.0 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 +0.0 -0.3 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -0.3 +0.1 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -0.4 +0.2 N.D. N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.1 +0.3 -1.1 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 +0.3 -0.1 N.D. N.D.
phage 36hr PHYTO4 MOI 1 -0.4 +0.5 +0.3 N.D. N.D.
phage 24hr PHYTO1 MOI 10 -0.4 +0.3 +0.4 N.D. N.D.
nophagecontrol 36hr Phyto Lib only -0.3 +0.5 +0.2 N.D. N.D.
phage 36hr PHYTO8 MOI 10 -0.3 +0.5 +0.3 N.D. N.D.
phage 36hr PHYTO10 MOI 10 -0.3 +0.5 +0.3 N.D. N.D.
phage 36hr PHYTO6 MOI 0.1 -0.2 +0.5 +0.3 N.D. N.D.
phage 36hr PHYTO2 MOI 0.1 -0.2 +0.5 +0.3 N.D. N.D.
phage 24hr PHYTO10 MOI 1 -0.2 +0.5 +0.3 N.D. N.D.
phage 36hr PHYTO7 MOI 1 -0.2 +0.6 +0.3 N.D. N.D.
phage P. phyto corn MOI 0.1 -0.2 +0.5 +0.3 N.D. N.D.
phage 36hr PHYTO4 MOI 1 -0.1 +0.6 +0.2 N.D. N.D.
phage 24hr PHYTO3 MOI 0.1 -0.2 +0.5 +0.4 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +0.4 -0.2 N.D. N.D.
phage 24hr PHYTO3 MOI 1 -0.2 +0.7 +0.4 N.D. N.D.
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.3 +0.5 +0.2 N.D. N.D.
nitrogen source Uridine (N) +0.1 +0.6 +0.3 N.D. N.D.
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.5 +0.3 +0.2 N.D. N.D.
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.5 +0.5 +0.2 N.D. N.D.
phage P. phyto corn MOI 1 +0.0 +0.8 +0.5 N.D. N.D.
carbon source succinate (C) +1.1 +0.5 +0.2 N.D. N.D.
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