Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS14335 and BPHYT_RS14340 are separated by 325 nucleotidesBPHYT_RS14340 and BPHYT_RS14345 are separated by 100 nucleotidesBPHYT_RS14345 and BPHYT_RS14350 are separated by 69 nucleotidesBPHYT_RS14350 and BPHYT_RS14355 are separated by 15 nucleotides BPHYT_RS14335: BPHYT_RS14335 - hypothetical protein, at 3,273,440 to 3,273,646 _RS14335 BPHYT_RS14340: BPHYT_RS14340 - Fis family transcriptional regulator, at 3,273,972 to 3,275,354 _RS14340 BPHYT_RS14345: BPHYT_RS14345 - beta-hexosaminidase, at 3,275,455 to 3,276,483 _RS14345 BPHYT_RS14350: BPHYT_RS14350 - holo-[acyl-carrier-protein] synthase, at 3,276,553 to 3,276,975 _RS14350 BPHYT_RS14355: BPHYT_RS14355 - pyridoxine 5'-phosphate synthase, at 3,276,991 to 3,277,755 _RS14355
Group Condition BPHYT_RS14335 BPHYT_RS14340 BPHYT_RS14345 BPHYT_RS14350 BPHYT_RS14355
carbon source 2-Deoxy-D-ribonic lithium salt (C) N.D. +0.1 -2.2 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.5 -1.4 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.4 -1.2 N.D. N.D.
phage 36hr PHYTO MOI 0.1 N.D. +0.7 -1.4 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days N.D. +0.9 -1.5 N.D. N.D.
phage 24hr PHYTO3 MOI 10 N.D. +0.9 -1.1 N.D. N.D.
phage 36hr PHYTO1 MOI 1 N.D. +0.6 -0.9 N.D. N.D.
nophagecontrol 36hr Phyto Lib Only N.D. +0.8 -1.0 N.D. N.D.
carbon source Suberic (C) N.D. +0.8 -0.9 N.D. N.D.
phage 24hr PHYTO2 MOI 1 N.D. +0.9 -0.9 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.9 -0.8 N.D. N.D.
phage 36hr PHYTO6 MOI 10 N.D. +0.8 -0.7 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days N.D. +0.8 -0.7 N.D. N.D.
phage 24hr PHYTO MOI 0.1 N.D. +1.0 -0.8 N.D. N.D.
phage 36hr PHYTO3 MOI 1 N.D. +1.0 -0.8 N.D. N.D.
phage 36hr PHYTO8 MOI 0.1 N.D. +1.0 -0.8 N.D. N.D.
phage 36hr PHYTO10 MOI 10 N.D. +0.9 -0.6 N.D. N.D.
phage 36hr PHYTO3 MOI 1 N.D. +0.9 -0.6 N.D. N.D.
phage 36hr PHYTO3 MOI 0.1 N.D. +0.9 -0.6 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days N.D. +1.0 -0.7 N.D. N.D.
nophagecontrol 36hr Phyto Lib only N.D. +0.9 -0.6 N.D. N.D.
phage 36hr PHYTO10 MOI 1 N.D. +1.0 -0.6 N.D. N.D.
phage 36hr PHYTO6 MOI 0.1 N.D. +1.0 -0.6 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. +1.1 -0.4 N.D. N.D.
phage 36hr PHYTO2 MOI 1 N.D. +1.3 -0.4 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +1.7 -0.7 N.D. N.D.
phage 36hr PHYTO11 MOI 1 N.D. +1.0 +0.5 N.D. N.D.
phage P. phyto corn MOI 0.1 N.D. +0.9 +0.6 N.D. N.D.
phage 24hr PHYTO3 MOI 10 N.D. +0.9 +0.7 N.D. N.D.
phage P. phyto corn MOI 1 N.D. +0.7 +1.2 N.D. N.D.
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