Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

Group	Condition	BPHYT_RS13225	BPHYT_RS13230	BPHYT_RS13235	BPHYT_RS13240	BPHYT_RS13245
stress	Bacitracin 0.25 mg/ml	N.D.	-0.2	-0.0	-0.1	-6.3
stress	Bacitracin 0.125 mg/ml	N.D.	-0.3	-0.0	-0.1	-6.0
stress	Polymyxin B sulfate 0.0625 mg/ml	N.D.	-0.2	-0.1	-0.1	-3.8
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	N.D.	+0.1	+0.0	-0.0	-3.2
in planta	Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days	N.D.	+0.2	-0.1	+0.0	-3.2
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	N.D.	-0.0	+0.1	+0.0	-3.1
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	N.D.	+0.2	+0.1	-0.2	-3.0
motility	outer cut, LB soft agar motility assay	N.D.	-0.2	+0.2	+0.0	-2.6
motility	outer cut, LB soft agar motility assay	N.D.	-0.3	+0.3	+0.3	-2.8
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.2	-0.3	-0.1	-2.3
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	N.D.	-0.1	+0.1	+0.1	-2.6
motility	inner cut, LB soft agar motility assay	N.D.	-0.1	-0.1	+0.1	-2.3
motility	inner cut, LB soft agar motility assay	N.D.	+0.0	-0.4	-0.0	-2.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	N.D.	+0.2	+0.0	-0.0	-2.5
stress	Lomefloxacin 0.001 mM	N.D.	-0.0	+0.2	-0.0	-2.4
stress	Benzethonium chloride 0.0016 mM	N.D.	-0.2	+0.2	-0.1	-2.1
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	N.D.	+0.1	+0.3	+0.0	-2.5
phage	36hr PHYTO8 MOI 10	N.D.	+0.0	-0.1	-0.2	-1.7
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	N.D.	-0.1	+0.0	-0.3	-1.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	-0.2	-0.2	+0.1	-1.7
in planta	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1	N.D.	+0.2	-0.4	-0.3	-1.6
stress	Zinc 0.5 mM	N.D.	-0.2	-0.0	+0.1	-1.7
phage	P. phyto PHYTO2 MOI 1	N.D.	+0.2	-0.2	+0.1	-2.0
in planta	Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10	N.D.	-0.2	-0.4	+0.4	-1.6
motility	outer cut, LB soft agar motility assay	N.D.	+0.4	-0.0	-0.2	-2.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	N.D.	+0.3	+0.2	-0.1	-1.8
in planta	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.1	+0.2	+0.1	-1.6
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.3	+0.1	+0.3	-1.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	+0.1	+0.2	+0.3	-1.5
phage	24hr PHYTO4 MOI 10	N.D.	-0.3	-0.6	-0.0	+1.2