Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS13175 and BPHYT_RS13180 are separated by 256 nucleotidesBPHYT_RS13180 and BPHYT_RS13185 are separated by 339 nucleotidesBPHYT_RS13185 and BPHYT_RS13190 are separated by 55 nucleotidesBPHYT_RS13190 and BPHYT_RS13195 are separated by 364 nucleotides BPHYT_RS13175: BPHYT_RS13175 - entericidin, at 3,006,944 to 3,007,078 _RS13175 BPHYT_RS13180: BPHYT_RS13180 - hypothetical protein, at 3,007,335 to 3,008,129 _RS13180 BPHYT_RS13185: BPHYT_RS13185 - 2,4-dienoyl-CoA reductase, at 3,008,469 to 3,010,517 _RS13185 BPHYT_RS13190: BPHYT_RS13190 - membrane protein, at 3,010,573 to 3,011,502 _RS13190 BPHYT_RS13195: BPHYT_RS13195 - hypothetical protein, at 3,011,867 to 3,012,112 _RS13195
Group Condition BPHYT_RS13175 BPHYT_RS13180 BPHYT_RS13185 BPHYT_RS13190 BPHYT_RS13195
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.7 -2.0 +0.0 N.D.
phage 24hr PHYTO11 MOI 0.1 N.D. -0.1 -1.9 -0.1 N.D.
phage 24hr PHYTO6 MOI 10 N.D. +0.1 -1.5 -0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.2 -0.1 -1.2 N.D.
phage 24hr PHYTO7 MOI 1 N.D. -0.2 -1.3 -0.0 N.D.
phage 36hr PHYTO4 MOI 1 N.D. -0.1 -1.3 -0.0 N.D.
phage 36hr PHYTO10 MOI 10 N.D. -0.1 -0.8 -0.4 N.D.
phage 24hr PHYTO3 MOI 10 N.D. -0.4 -0.8 -0.2 N.D.
phage 24hr PHYTO2 MOI 0.1 N.D. -0.5 -0.8 +0.0 N.D.
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.4 -0.4 -0.5 N.D.
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days N.D. +0.0 -0.5 -0.7 N.D.
phage 24hr PHYTO3 MOI 1 N.D. +0.2 -1.3 +0.4 N.D.
phage 36hr PHYTO7 MOI 1 N.D. +0.5 -1.0 -0.1 N.D.
phage P. phyto PHYTO2 MOI 1 N.D. +0.5 -0.9 -0.2 N.D.
phage 24hr PHYTO6 MOI 1 N.D. -0.2 -0.7 +0.5 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.2 +0.3 -0.8 N.D.
phage 36hr PHYTO4 MOI 1 N.D. +0.1 -0.8 +0.5 N.D.
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent N.D. -0.1 -0.6 +0.6 N.D.
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days N.D. +0.2 +0.7 -0.6 N.D.
temperature LB, 37C N.D. -0.3 -0.2 +0.8 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. -0.2 +1.4 -0.8 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.1 +0.8 -0.4 N.D.
carbon source Phenylacetic 5 mM (C) N.D. -0.3 +1.4 -0.6 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. +0.4 +0.7 -0.4 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. -0.1 +1.1 -0.2 N.D.
phage 24hr PHYTO7 MOI 10 N.D. -0.3 +0.8 +0.4 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. -0.1 +1.3 -0.3 N.D.
carbon source D-Glucose 20 mM (C) N.D. -0.1 +1.4 -0.2 N.D.
carbon source D-Glucose 20 mM (C) N.D. +0.0 +1.4 -0.1 N.D.
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days N.D. +0.0 +1.5 +0.1 N.D.
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BPHYT_RS13175
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BPHYT_RS13180
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BPHYT_RS13195
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