Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS11800 and BPHYT_RS11805 are separated by 45 nucleotidesBPHYT_RS11805 and BPHYT_RS11810 are separated by 351 nucleotidesBPHYT_RS11810 and BPHYT_RS11815 are separated by 238 nucleotidesBPHYT_RS11815 and BPHYT_RS11820 are separated by 144 nucleotides BPHYT_RS11800: BPHYT_RS11800 - acetate permease, at 2,675,144 to 2,676,730 _RS11800 BPHYT_RS11805: BPHYT_RS11805 - hypothetical protein, at 2,676,776 to 2,677,369 _RS11805 BPHYT_RS11810: BPHYT_RS11810 - LysR family transcriptional regulator, at 2,677,721 to 2,678,599 _RS11810 BPHYT_RS11815: BPHYT_RS11815 - alcohol dehydrogenase, at 2,678,838 to 2,679,863 _RS11815 BPHYT_RS11820: BPHYT_RS11820 - amidohydrolase, at 2,680,008 to 2,681,459 _RS11820
Group Condition BPHYT_RS11800 BPHYT_RS11805 BPHYT_RS11810 BPHYT_RS11815 BPHYT_RS11820
phage 24hr PHYTO3 MOI 10 -0.0 -3.6 -0.3 -0.4 -0.1
vitamin With vitamins t2 -0.1 -0.7 -2.2 -0.2 -0.0
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.5 -0.3 -3.4 -0.7 +1.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -2.1 +0.4 -0.5 -0.1
phage P. phyto corn MOI 1 +0.3 -2.5 -1.2 +1.1 +0.7
phage 36hr PHYTO6 MOI 10 -0.2 -1.6 -0.7 +1.2 -0.4
phage 24hr PHYTO6 MOI 10 -0.5 -0.1 -2.0 +1.2 -0.3
phage 36hr PHYTO2 MOI 1 +0.1 -2.3 -0.5 +1.4 -0.2
phage 36hr PHYTO1 MOI 1 +0.2 -0.6 -1.5 +1.2 -0.1
phage 24hr PHYTO10 MOI 10 -0.3 +0.9 -2.1 +0.8 +0.2
phage 24hr PHYTO8 MOI 1 -0.1 -1.3 -0.4 +1.5 -0.1
phage PHYTO3 MOI 0.1 +0.2 +0.4 +1.2 -2.5 +0.4
phage 36hr PHYTO8 MOI 10 +0.3 +0.2 -1.5 +1.1 -0.4
phage 36hr PHYTO3 MOI 1 +0.3 -1.5 +0.3 +0.9 +0.2
nophagecontrol 36hr Phyto Lib only +0.3 +0.5 -1.3 +1.3 -0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.2 -2.2 +1.0 +0.5 +1.0
phage 24hr PHYTO6 MOI 0.1 +0.3 -1.4 +1.0 +0.8 -0.0
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.6 -1.0 -0.4 +0.8 +1.2
phage 24hr PHYTO11 MOI 0.1 -0.2 +0.9 +0.2 +1.2 -0.7
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.5 +0.5 -0.8 +0.8 +0.8
phage 24hr PHYTO4 MOI 10 +0.3 -0.6 +0.9 +1.4 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 -0.3 +2.7 -0.3 -0.3
supernatant control Vogels_fungal_media 0.1X -0.1 -0.4 +1.5 +0.4 +0.8
phage 24hr PHYTO9 MOI 0.1 +0.1 -0.6 +0.9 +1.4 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 -0.8 +3.5 -0.5 -0.4
supernatant control Vogels_fungal_media; pH 5.5 +0.3 -0.4 +0.4 +1.0 +1.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.9 -0.4 +1.0 +0.9 +0.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.6 +0.9 -0.3 +0.8 +0.7
phage 36hr PHYTO4 MOI 1 +0.1 +0.4 +0.6 +1.9 +0.8
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.2 +0.6 +3.6 +0.5 -0.4
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BPHYT_RS11800
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BPHYT_RS11805
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