Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

Group	Condition	BPHYT_RS11170	BPHYT_RS11175	BPHYT_RS11180	BPHYT_RS11185	BPHYT_RS11190
carbon source	adipate (C)	-0.4	-4.7	-0.1	-0.1	-0.4
carbon source	2-Deoxy-D-ribonic lithium salt (C)	+0.5	-0.6	-1.8	-1.4	-1.2
in planta	Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10	-1.0	+0.2	-1.3	-0.7	-1.4
in planta	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1	+0.2	-0.2	-0.8	-1.5	-1.3
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	-1.1	+0.3	-0.5	-0.4	-1.8
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.7	-0.4	-0.1	-0.3	-0.2
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-1.6	-0.3	+0.1	-0.3	-0.5
in planta	Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days	-0.7	-0.0	-0.4	-0.7	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.9	-0.1	-0.1	-0.3	-0.2
phage	36hr PHYTO4 MOI 1	-2.4	-0.1	+0.0	-0.6	+0.6
lb_dap plate control and outgrow on gent	LB_DAP agar plate, outgrowth in LB_gent	-2.3	-0.0	-0.5	+0.3	+0.1
nitrogen source	L-Alanine (N)	-1.3	-0.1	-0.4	+0.3	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.5	+0.1	-0.2	+0.5	-0.4
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7	-0.2	+0.4	-0.6	+0.7
phage	36hr PHYTO8 MOI 0.1	+1.7	-0.5	-0.1	-0.4	-0.7
phage	24hr PHYTO11 MOI 1	+1.0	-0.3	+0.4	-0.6	-0.5
carbon source	Disodium Glutarate (C)	+0.6	-2.6	+0.7	+0.7	+0.8
carbon source	Disodium Glutarate (C)	+0.8	-2.5	+0.3	+0.8	+0.8
phage	36hr PHYTO9 MOI 0.1	+1.5	-0.2	-0.4	-0.4	-0.3
phage	P. phyto PHYTO2 MOI 1	+1.3	+0.3	-0.8	-0.0	-0.2
phage	24hr PHYTO10 MOI 10	+1.3	-0.4	-0.2	-0.2	+0.4
phage	24hr PHYTO4 MOI 10	+1.3	-0.1	-0.2	-0.7	+0.6
phage	36hr PHYTO1 MOI 10	+1.7	-0.4	-0.0	-0.3	+0.1
phage	24hr PHYTO3 MOI 10	+1.0	-0.1	+0.1	-0.6	+0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+2.2	-0.2	+0.2	-0.1	-0.7
phage	36hr PHYTO2 MOI 1	+1.4	-0.3	+0.5	-0.7	+0.5
nophagecontrol	24hr Phyto Lib Only	+0.8	+0.0	+0.5	-0.4	+0.9
phage	24hr PHYTO3 MOI 1	+1.6	-0.0	+0.9	-0.5	+0.2
carbon source	Phenylacetic 5 mM (C)	+0.6	-0.1	+0.9	+0.6	+0.3
carbon source	succinate (C)	+0.6	-0.0	+2.1	+2.5	+2.5