Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS09785 and BPHYT_RS09790 are separated by 116 nucleotidesBPHYT_RS09790 and BPHYT_RS09795 are separated by 710 nucleotidesBPHYT_RS09795 and BPHYT_RS09800 are separated by 361 nucleotidesBPHYT_RS09800 and BPHYT_RS09805 are separated by 251 nucleotides BPHYT_RS09785: BPHYT_RS09785 - glycosyl transferase family 1, at 2,221,436 to 2,223,892 _RS09785 BPHYT_RS09790: BPHYT_RS09790 - acyltransferase, at 2,224,009 to 2,225,220 _RS09790 BPHYT_RS09795: BPHYT_RS09795 - UTP--glucose-1-phosphate uridylyltransferase, at 2,225,931 to 2,226,848 _RS09795 BPHYT_RS09800: BPHYT_RS09800 - hypothetical protein, at 2,227,210 to 2,227,542 _RS09800 BPHYT_RS09805: BPHYT_RS09805 - hypothetical protein, at 2,227,794 to 2,228,591 _RS09805
Group Condition BPHYT_RS09785 BPHYT_RS09790 BPHYT_RS09795 BPHYT_RS09800 BPHYT_RS09805
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.4 -0.2 -0.8 N.D. -0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -0.1 -1.1 N.D. -0.4
phage 36hr PHYTO9 MOI 0.1 -0.5 -0.4 -0.6 N.D. -0.4
phage 36hr PHYTO11 MOI 0.1 -0.5 -0.3 -1.2 N.D. +0.1
phage P. phyto PHYTO2 MOI 1 -0.2 -0.9 -0.5 N.D. -0.0
phage 36hr PHYTO8 MOI 0.1 -0.3 -0.2 -1.0 N.D. -0.1
phage 36hr PHYTO4 MOI 1 -0.1 -0.0 -0.9 N.D. -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -0.7 +0.5 N.D. -0.8
phage 24hr PHYTO10 MOI 1 -0.5 -0.2 -0.7 N.D. +0.2
phage 36hr PHYTO3 MOI 1 -0.1 -0.7 -0.7 N.D. +0.1
phage 36hr PHYTO1 MOI 10 -0.4 -0.4 -0.8 N.D. +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -0.2 +0.4 N.D. -0.9
temperature LB, 37C -0.3 -0.3 -0.7 N.D. +0.2
phage 36hr PHYTO6 MOI 1 -0.7 +0.2 -0.7 N.D. +0.2
phage 24hr PHYTO2 MOI 1 -0.1 +0.3 -1.3 N.D. +0.0
phage 36hr PHYTO11 MOI 0.1 -0.1 -0.3 -0.8 N.D. +0.3
nophagecontrol 36hr Phyto Lib only -0.6 +0.3 -0.7 N.D. +0.1
phage 24hr PHYTO3 MOI 1 -0.2 +0.4 -0.8 N.D. -0.2
phage 36hr PHYTO3 MOI 1 -0.6 +0.5 -0.5 N.D. -0.1
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.1 -0.4 -0.7 N.D. +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -0.3 +0.4 N.D. -0.4
phage 24hr PHYTO MOI 0.1 -0.5 -0.3 -0.2 N.D. +0.6
phage 24hr PHYTO10 MOI 10 -0.2 -0.3 -0.4 N.D. +0.6
phage P. phyto corn MOI 1 -0.5 +0.5 -0.5 N.D. +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 +0.4 -0.6 N.D. +0.4
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.3 +0.6 -0.3 N.D. +0.7
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.2 +0.8 -0.2 N.D. +0.5
phage P. phyto PHYTO2 MOI 1 +0.1 +0.8 -0.3 N.D. +0.3
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.0 +0.6 +0.6 N.D. +0.2
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.3 +0.5 +0.6 N.D. +0.4
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