Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS09515 and BPHYT_RS09520 are separated by 331 nucleotidesBPHYT_RS09520 and BPHYT_RS09525 overlap by 11 nucleotidesBPHYT_RS09525 and BPHYT_RS09530 are separated by 75 nucleotidesBPHYT_RS09530 and BPHYT_RS09535 are separated by 11 nucleotides BPHYT_RS09515: BPHYT_RS09515 - phosphoribosylformylglycinamidine synthase, at 2,157,020 to 2,161,105 _RS09515 BPHYT_RS09520: BPHYT_RS09520 - XRE family transcriptional regulator, at 2,161,437 to 2,161,721 _RS09520 BPHYT_RS09525: BPHYT_RS09525 - toxin HipA, at 2,161,711 to 2,163,003 _RS09525 BPHYT_RS09530: BPHYT_RS09530 - peptidyl-prolyl cis-trans isomerase, at 2,163,079 to 2,163,858 _RS09530 BPHYT_RS09535: BPHYT_RS09535 - BolA family transcriptional regulator, at 2,163,870 to 2,164,190 _RS09535
Group Condition BPHYT_RS09515 BPHYT_RS09520 BPHYT_RS09525 BPHYT_RS09530 BPHYT_RS09535
carbon source L-Proline (C) -5.9 N.D. -0.8 N.D. -0.2
nitrogen source Ammonium chloride (N) -5.5 N.D. -0.6 N.D. -0.7
carbon source Sebacic (C) -5.6 N.D. -0.2 N.D. -0.8
carbon source Sebacic (C) -5.3 N.D. -0.1 N.D. -1.0
carbon source D-Mannose (C) -5.8 N.D. -0.3 N.D. -0.3
carbon source D-Gluconic Acid (C) -6.5 N.D. +0.1 N.D. +0.1
nitrogen source Uridine (N) -5.6 N.D. -0.5 N.D. -0.3
carbon source L-Tryptophan (C) -6.2 N.D. -0.1 N.D. +0.1
carbon source Suberic (C) -5.5 N.D. -0.2 N.D. -0.5
nitrogen source L-Asparagine (N) -5.9 N.D. +0.2 N.D. -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -4.7 N.D. -0.9 N.D. -0.6
nitrogen source L-Proline (N) -5.6 N.D. -0.0 N.D. -0.5
carbon source Protocatechuic Acid (C) -5.5 N.D. +0.1 N.D. -0.7
carbon source D-Lactate (C) -6.4 N.D. +0.2 N.D. +0.2
carbon source Putrescine (C) -5.8 N.D. -0.2 N.D. -0.1
carbon source Disodium Glutarate (C) -5.5 N.D. +0.1 N.D. -0.7
carbon source L-Glutamine (C) -6.0 N.D. +0.1 N.D. -0.1
carbon source L-Malic (C) -5.9 N.D. +0.1 N.D. -0.1
carbon source D-Fructose (C) -6.3 N.D. +0.4 N.D. -0.1
carbon source D-Sorbitol (C) -6.0 N.D. -0.1 N.D. +0.2
carbon source Tween 20 (C) -6.1 N.D. -0.3 N.D. +0.5
nutrient casaminos -5.7 N.D. -0.6 N.D. +0.4
nitrogen source L-Glutamic (N) -5.7 N.D. -0.3 N.D. +0.2
nitrogen source L-Phenylalanine (N) -5.5 N.D. +0.4 N.D. -0.5
carbon source Azelaic (C) -5.8 N.D. +0.4 N.D. -0.1
carbon source D-Galactose (C) -5.8 N.D. +0.1 N.D. +0.2
nitrogen source L-Citrulline (N) -5.5 N.D. +0.3 N.D. -0.3
nitrogen source L-Lysine (N) -5.7 N.D. +1.0 N.D. -0.7
carbon source L-Histidine (C) -5.9 N.D. +0.2 N.D. +0.3
nitrogen source NAG (N) -5.2 N.D. +0.8 N.D. -0.3
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