Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS09500 and BPHYT_RS09505 are separated by 234 nucleotidesBPHYT_RS09505 and BPHYT_RS09510 are separated by 119 nucleotidesBPHYT_RS09510 and BPHYT_RS09515 are separated by 426 nucleotidesBPHYT_RS09515 and BPHYT_RS09520 are separated by 331 nucleotides BPHYT_RS09500: BPHYT_RS09500 - glucose-6-phosphate isomerase, at 2,151,729 to 2,153,351 _RS09500 BPHYT_RS09505: BPHYT_RS09505 - carbohydrate kinase, at 2,153,586 to 2,155,175 _RS09505 BPHYT_RS09510: BPHYT_RS09510 - amino acid dehydrogenase, at 2,155,295 to 2,156,593 _RS09510 BPHYT_RS09515: BPHYT_RS09515 - phosphoribosylformylglycinamidine synthase, at 2,157,020 to 2,161,105 _RS09515 BPHYT_RS09520: BPHYT_RS09520 - XRE family transcriptional regulator, at 2,161,437 to 2,161,721 _RS09520
Group Condition BPHYT_RS09500 BPHYT_RS09505 BPHYT_RS09510 BPHYT_RS09515 BPHYT_RS09520
carbon source D-Lactate (C) -7.7 +0.1 +0.1 -6.4 N.D.
carbon source Tween 20 (C) -7.3 -0.3 +0.1 -6.1 N.D.
carbon source L-Proline (C) -7.7 -0.0 +0.3 -5.9 N.D.
carbon source Disodium Glutarate (C) -7.7 -0.1 -0.0 -5.5 N.D.
carbon source L-Fucose (C) -7.5 -0.1 -0.2 -5.4 N.D.
carbon source D-Gluconic Acid (C) -6.8 +0.1 +0.1 -6.5 N.D.
carbon source L-Glutamine (C) -7.3 +0.1 +0.1 -6.0 N.D.
carbon source L-Phenylalanine (C) -7.5 -0.0 -0.0 -5.5 N.D.
carbon source pyruvate (C) -7.8 -0.1 -0.0 -5.1 N.D.
supernatant control Vogels_fungal_media; pH 5.5 -7.5 -0.5 -0.7 -4.3 N.D.
carbon source D-Fructose (C) -6.7 -0.1 +0.1 -6.3 N.D.
carbon source D,L-Lactate (C) -7.6 -0.1 +0.1 -5.3 N.D.
carbon source L-Asparagine (C) -7.6 +0.1 +0.3 -5.7 N.D.
nitrogen source L-Serine (N) -7.3 -0.3 +0.0 -5.3 N.D.
carbon source L-Tryptophan (C) -6.7 +0.2 -0.1 -6.2 N.D.
carbon source NAG (C) -7.7 +0.2 -0.0 -5.3 N.D.
nitrogen source Ammonium chloride (N) -7.1 +0.2 -0.5 -5.5 N.D.
carbon source L-Rhamnose (C) -7.1 +0.1 +0.1 -5.6 N.D.
carbon source Putrescine (C) -6.9 -0.0 +0.1 -5.8 N.D.
nitrogen source Putrescine (N) -6.9 -0.1 -0.2 -5.3 N.D.
nitrogen source L-Alanine (N) -7.1 +0.1 +0.1 -5.5 N.D.
carbon source D-Alanine (C) -7.8 +0.2 -0.1 -4.8 N.D.
nitrogen source L-Citrulline (N) -7.1 +0.4 -0.2 -5.5 N.D.
carbon source L-Histidine (C) -6.4 -0.0 -0.0 -5.9 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -7.4 -0.2 -0.4 -4.3 N.D.
carbon source D-Mannose (C) -6.5 +0.2 -0.1 -5.8 N.D.
carbon source L-Malic (C) -6.1 +0.1 -0.1 -5.9 N.D.
nitrogen source D-Alanine (N) -7.0 +0.1 +0.2 -5.4 N.D.
nitrogen source Carnitine Hydrochloride (N) -6.8 +0.3 -0.3 -5.0 N.D.
carbon source L-Lactate (C) -6.4 +0.1 +0.3 -5.7 N.D.
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