Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS08690 and BPHYT_RS08695 are separated by 157 nucleotidesBPHYT_RS08695 and BPHYT_RS08700 are separated by 88 nucleotidesBPHYT_RS08700 and BPHYT_RS08705 are separated by 143 nucleotidesBPHYT_RS08705 and BPHYT_RS08710 are separated by 430 nucleotides BPHYT_RS08690: BPHYT_RS08690 - hypothetical protein, at 1,975,047 to 1,975,292 _RS08690 BPHYT_RS08695: BPHYT_RS08695 - tRNA-His, at 1,975,450 to 1,975,525 _RS08695 BPHYT_RS08700: BPHYT_RS08700 - tRNA-dihydrouridine synthase A, at 1,975,614 to 1,976,615 _RS08700 BPHYT_RS08705: BPHYT_RS08705 - hypothetical protein, at 1,976,759 to 1,977,064 _RS08705 BPHYT_RS08710: BPHYT_RS08710 - hypothetical protein, at 1,977,495 to 1,979,087 _RS08710
Group Condition BPHYT_RS08690 BPHYT_RS08695 BPHYT_RS08700 BPHYT_RS08705 BPHYT_RS08710
carbon source Dodecandioic (C) +0.1 N.D. -0.6 -1.1 -0.2
phage 24hr PHYTO4 MOI 10 -0.5 N.D. -1.2 +0.4 -0.5
carbon source Malonic (C) -0.3 N.D. -0.7 -0.4 -0.3
phage 24hr PHYTO2 MOI 1 -0.9 N.D. -0.1 +0.3 -0.9
phage 36hr PHYTO2 MOI 1 -0.5 N.D. -0.1 -0.5 -0.5
phage 24hr PHYTO MOI 0.1 -0.7 N.D. -0.1 -0.4 -0.2
phage 24hr PHYTO3 MOI 0.1 -0.6 N.D. -0.3 +0.1 -0.5
phage P. phyto corn MOI 1 -0.4 N.D. +0.4 -1.3 -0.0
phage 24hr PHYTO11 MOI 0.1 -0.3 N.D. +0.2 -0.6 -0.4
phage 24hr PHYTO6 MOI 10 +0.3 N.D. -0.9 -0.2 -0.2
phage 24hr PHYTO10 MOI 10 -0.6 N.D. -0.4 +0.5 -0.5
carbon source D-Glucose (C) +0.5 N.D. -0.5 -0.9 -0.0
phage 36hr PHYTO10 MOI 10 -0.5 N.D. -0.8 +0.5 -0.2
nitrogen source L-Lysine (N) -0.2 N.D. -0.7 +0.4 -0.3
phage 24hr PHYTO1 MOI 10 -0.6 N.D. -0.3 +0.5 -0.2
phage P. phyto PHYTO2 MOI 1 +0.1 N.D. +0.3 -1.1 +0.0
carbon source propionate (C) +0.3 N.D. -0.3 -0.7 +0.5
carbon source adipate (C) +0.4 N.D. +0.3 -0.6 -0.2
phage PHYTO3 MOI 0.1 +0.1 N.D. -0.6 +0.7 -0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.4 N.D. -0.6 +0.6 -0.3
carbon source D-Fructose (C) +0.4 N.D. -0.4 +0.5 -0.2
phage 24hr PHYTO3 MOI 10 -0.2 N.D. -0.9 +1.1 +0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.8 N.D. -0.7 +0.2 +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 N.D. -0.3 +0.9 +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.1 N.D. -0.3 +0.9 +0.2
phage 24hr PHYTO11 MOI 1 -0.2 N.D. +0.1 +1.2 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.2 N.D. +0.4 +1.1 -0.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.3 N.D. +0.3 +0.6 +0.5
phage 24hr PHYTO8 MOI 1 +0.4 N.D. +0.4 +1.2 +0.1
carbon source Malonic (C) +0.6 N.D. -0.2 +1.5 +0.3
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BPHYT_RS08690
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BPHYT_RS08695
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