Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS08555 and BPHYT_RS08560 are separated by 113 nucleotidesBPHYT_RS08560 and BPHYT_RS08565 are separated by 205 nucleotidesBPHYT_RS08565 and BPHYT_RS08570 are separated by 134 nucleotidesBPHYT_RS08570 and BPHYT_RS08575 are separated by 117 nucleotides BPHYT_RS08555: BPHYT_RS08555 - ABC transporter permease, at 1,956,189 to 1,956,848 _RS08555 BPHYT_RS08560: BPHYT_RS08560 - cysteine ABC transporter substrate-binding protein, at 1,956,962 to 1,957,756 _RS08560 BPHYT_RS08565: BPHYT_RS08565 - dihydroorotate dehydrogenase, at 1,957,962 to 1,958,984 _RS08565 BPHYT_RS08570: BPHYT_RS08570 - arginyl-tRNA-protein transferase, at 1,959,119 to 1,959,940 _RS08570 BPHYT_RS08575: BPHYT_RS08575 - leucyl/phenylalanyl-tRNA--protein transferase, at 1,960,058 to 1,960,795 _RS08575
Group Condition BPHYT_RS08555 BPHYT_RS08560 BPHYT_RS08565 BPHYT_RS08570 BPHYT_RS08575
carbon source m-Inositol (C) -0.1 -0.5 -4.2 -0.0 -0.2
carbon source Tween 20 (C) -0.4 -0.2 -3.6 -0.1 -0.2
carbon source Trisodium citrate (C) -0.0 +0.2 -4.3 -0.2 -0.1
carbon source D-Glucosamine Hydrochloride (C) -0.0 +0.1 -4.2 -0.4 +0.2
carbon source Gly-Glu (C) +0.0 +0.0 -4.1 -0.5 +0.2
nutrient L-Serine -0.1 +0.2 -3.8 -0.4 -0.2
carbon source L-Histidine (C) -0.1 -0.2 -3.7 -0.3 -0.1
carbon source D-Sorbitol (C) -0.1 -0.2 -3.8 -0.1 -0.0
carbon source L-Fucose (C) +0.1 -0.0 -4.1 -0.2 -0.1
carbon source L-Arginine (C) -0.0 +0.1 -4.4 +0.0 -0.0
carbon source Disodium Glutarate (C) -0.2 +0.1 -4.0 -0.3 +0.2
carbon source NAG (C) -0.1 -0.2 -3.8 -0.3 +0.1
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.3 -0.4 -2.8 -0.4 -0.8
carbon source D-Glucose (C) -0.4 +0.2 -3.5 -0.1 -0.3
carbon source Sebacic (C) -0.1 +0.3 -3.7 -0.6 -0.0
nutrient L-Serine +0.0 +0.1 -3.7 -0.5 +0.0
carbon source Dodecandioic (C) -0.2 +0.3 -3.7 -0.2 -0.2
nutrient L-Histidine -0.0 +0.2 -3.7 -0.2 -0.3
carbon source Suberic (C) -0.5 +0.2 -3.5 -0.0 -0.2
carbon source Xylitol (C) -0.0 +0.3 -4.2 +0.1 -0.1
carbon source Azelaic (C) -0.2 +0.4 -3.7 -0.2 -0.2
carbon source D-Galacturonic Acid (C) +0.0 -0.3 -3.6 -0.2 +0.3
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.3 +0.3 -2.6 -0.6 -0.5
carbon source L-Glutamine (C) -0.2 -0.3 -3.5 +0.8 -0.3
carbon source succinate (C) -0.2 +0.0 -3.6 +0.2 +0.3
carbon source Protocatechuic Acid (C) -0.0 +0.4 -3.5 +0.1 -0.3
carbon source propionate (C) -0.2 +0.1 -3.6 +0.3 +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.0 +0.6 -2.7 -0.4 -0.8
carbon source Disodium Glutarate (C) -0.1 +0.4 -3.7 -0.1 +0.5
nutrient L-Histidine +0.3 +0.2 -3.6 +0.1 +0.2
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