Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS08355 and BPHYT_RS08360 are separated by 337 nucleotidesBPHYT_RS08360 and BPHYT_RS08365 are separated by 326 nucleotidesBPHYT_RS08365 and BPHYT_RS08370 are separated by 502 nucleotidesBPHYT_RS08370 and BPHYT_RS08375 are separated by 42 nucleotides BPHYT_RS08355: BPHYT_RS08355 - hypothetical protein, at 1,914,561 to 1,914,983 _RS08355 BPHYT_RS08360: BPHYT_RS08360 - LysR family transcriptional regulator, at 1,915,321 to 1,916,211 _RS08360 BPHYT_RS08365: BPHYT_RS08365 - 3-oxoacyl-ACP reductase, at 1,916,538 to 1,917,248 _RS08365 BPHYT_RS08370: BPHYT_RS08370 - glyoxalase, at 1,917,751 to 1,918,362 _RS08370 BPHYT_RS08375: BPHYT_RS08375 - enoyl-CoA hydratase, at 1,918,405 to 1,919,268 _RS08375
Group Condition BPHYT_RS08355 BPHYT_RS08360 BPHYT_RS08365 BPHYT_RS08370 BPHYT_RS08375
phage 24hr PHYTO6 MOI 0.1 -0.8 -2.8 -0.3 N.D. N.D.
phage 24hr PHYTO7 MOI 10 -1.8 -1.5 -0.4 N.D. N.D.
phage 24hr PHYTO MOI 0.1 -2.3 -0.7 -0.4 N.D. N.D.
phage 36hr PHYTO2 MOI 1 -0.6 -2.6 -0.3 N.D. N.D.
phage 24hr PHYTO2 MOI 1 -2.4 -0.6 -0.1 N.D. N.D.
phage 36hr PHYTO6 MOI 1 -1.6 -0.7 -0.5 N.D. N.D.
carbon source Sebacic (C) -1.0 -1.6 -0.2 N.D. N.D.
phage 36hr PHYTO8 MOI 10 -2.2 -0.4 +0.0 N.D. N.D.
phage 24hr PHYTO4 MOI 0.1 -1.1 -1.4 +0.0 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -0.4 -0.8 N.D. N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -1.8 -0.3 -0.3 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.5 -0.2 -0.6 N.D. N.D.
nophagecontrol 36hr Phyto Lib only -1.0 -1.5 +0.1 N.D. N.D.
phage 24hr PHYTO2 MOI 0.1 -0.7 -1.4 -0.2 N.D. N.D.
phage 24hr PHYTO10 MOI 1 +0.2 -2.4 -0.1 N.D. N.D.
phage 24hr PHYTO4 MOI 10 -0.8 -1.6 +0.1 N.D. N.D.
phage 24hr PHYTO9 MOI 10 +0.1 -2.2 +0.1 N.D. N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.3 -1.3 -0.6 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 -1.2 -0.8 N.D. N.D.
phage 24hr PHYTO MOI 0.1 +0.4 -1.3 -0.6 N.D. N.D.
phage 24hr PHYTO2 MOI 0.1 +0.9 -2.3 -0.0 N.D. N.D.
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.8 -1.2 +0.9 N.D. N.D.
phage 24hr PHYTO9 MOI 0.1 -1.6 +0.4 +0.2 N.D. N.D.
phage 24hr PHYTO3 MOI 0.1 +0.8 -1.3 -0.2 N.D. N.D.
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +1.1 -1.1 +0.6 N.D. N.D.
supernatant control Vogels_fungal_media; pH 5.5 -0.9 +1.0 +0.6 N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -1.1 +1.4 +0.8 N.D. N.D.
supernatant control Vogels_fungal_media 0.1X -0.6 +1.0 +0.6 N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.5 +1.0 +0.7 N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.6 +1.2 +0.6 N.D. N.D.
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