Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS07845 and BPHYT_RS07850 are separated by 174 nucleotidesBPHYT_RS07850 and BPHYT_RS07855 are separated by 112 nucleotidesBPHYT_RS07855 and BPHYT_RS07860 overlap by 4 nucleotidesBPHYT_RS07860 and BPHYT_RS07865 are separated by 38 nucleotides BPHYT_RS07845: BPHYT_RS07845 - LysR family transcriptional regulator, at 1,787,482 to 1,788,405 _RS07845 BPHYT_RS07850: BPHYT_RS07850 - catechol 1,2-dioxygenase, at 1,788,580 to 1,789,515 _RS07850 BPHYT_RS07855: BPHYT_RS07855 - benzoate 1,2-dioxygenase subunit alpha, at 1,789,628 to 1,790,986 _RS07855 BPHYT_RS07860: BPHYT_RS07860 - benzoate 1,2-dioxygenase subunit beta, at 1,790,983 to 1,791,471 _RS07860 BPHYT_RS07865: BPHYT_RS07865 - NADH oxidase, at 1,791,510 to 1,792,532 _RS07865
Group Condition BPHYT_RS07845 BPHYT_RS07850 BPHYT_RS07855 BPHYT_RS07860 BPHYT_RS07865
phage 24hr PHYTO11 MOI 1 -1.7 -0.4 -0.8 -0.0 N.D.
phage 36hr PHYTO11 MOI 0.1 -0.7 -1.0 -1.1 -0.1 N.D.
phage 36hr PHYTO1 MOI 1 -1.2 -0.3 -1.3 -0.1 N.D.
phage 24hr PHYTO10 MOI 1 -0.5 -0.8 -0.9 -0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.3 -0.3 +0.0 -1.1 N.D.
phage PHYTO3 MOI 0.1 -0.7 +0.3 -0.3 -2.1 N.D.
nitrogen source L-Isoleucine (N) -0.7 -0.5 -0.2 -1.4 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -1.0 -0.5 -0.3 -0.9 N.D.
phage 36hr PHYTO4 MOI 1 -1.5 -1.4 -0.3 +0.5 N.D.
phage 36hr PHYTO6 MOI 1 -2.8 +0.1 +0.1 +0.1 N.D.
phage 36hr PHYTO10 MOI 10 +0.3 +0.2 -0.8 -2.1 N.D.
phage 36hr PHYTO11 MOI 1 -1.0 -1.0 -0.9 +0.7 N.D.
phage 24hr PHYTO11 MOI 0.1 -1.6 -0.4 -0.3 +0.4 N.D.
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.3 -1.7 -0.4 +0.8 N.D.
phage 36hr PHYTO4 MOI 1 -1.0 +1.1 -0.4 -1.2 N.D.
nophagecontrol 24hr Phyto Lib Only -1.4 -0.6 +0.0 +0.7 N.D.
phage 24hr PHYTO1 MOI 1 -1.1 -0.4 -0.7 +0.9 N.D.
nitrogen source L-Serine (N) -0.2 -1.1 -0.7 +0.9 N.D.
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +1.3 -0.0 -0.5 -1.8 N.D.
phage P. phyto corn MOI 0.1 +0.4 +0.8 -1.0 -0.9 N.D.
phage P. phyto PHYTO2 MOI 0.1 +1.1 +0.6 -0.3 -2.0 N.D.
phage 36hr PHYTO11 MOI 1 -1.4 +0.4 -0.3 +0.8 N.D.
phage 36hr PHYTO2 MOI 1 -0.3 -0.3 -1.1 +1.2 N.D.
phage 36hr PHYTO8 MOI 0.1 -0.9 -1.0 -0.3 +1.7 N.D.
phage 24hr PHYTO7 MOI 10 -1.0 +0.6 -0.5 +0.6 N.D.
phage 24hr PHYTO6 MOI 0.1 -0.7 +0.4 -0.8 +0.8 N.D.
nophagecontrol 36hr Phyto Lib only -0.9 +0.6 -0.5 +1.0 N.D.
phage 36hr PHYTO7 MOI 1 -0.7 -0.5 +0.6 +1.2 N.D.
phage 36hr PHYTO3 MOI 1 -1.6 +1.4 -0.0 +1.1 N.D.
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +1.6 +0.3 -0.7 +0.1 N.D.
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