Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS06770	BPHYT_RS06775	BPHYT_RS06780	BPHYT_RS06785	BPHYT_RS06790
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.1	-1.2	-0.3	+0.1	-1.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	-1.6	+0.0	+0.0	-1.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.0	-0.9	-0.6	+0.0	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.1	-1.1	-0.3	-0.0	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.1	-0.5	-0.3	+0.1	-1.9
phage	PHYTO3 MOI 0.1	+0.1	-1.0	-0.2	-0.2	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3	-0.7	-0.2	+0.1	-1.7
phage	24hr PHYTO3 MOI 1	+0.3	-2.0	+0.5	+0.1	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.1	-1.5	+0.2	+0.1	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	-0.5	-0.6	+0.1	-1.1
stress	Chloride 200 mM	+0.1	-0.1	-0.4	+0.1	-1.5
phage	36hr PHYTO8 MOI 10	+0.1	-1.6	+0.2	+0.0	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.1	+0.1	-0.7	+0.0	-1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.2	-0.9	-0.3	+0.2	-1.0
phage	24hr PHYTO9 MOI 10	+0.2	-1.7	+0.3	+0.0	-0.6
phage	24hr PHYTO2 MOI 1	+0.2	-0.7	+0.4	-0.3	-1.2
phage	36hr PHYTO3 MOI 1	+0.2	-1.2	+0.1	+0.1	-0.8
phage	P. phyto PHYTO2 MOI 1	-0.1	-1.6	+0.5	+0.2	-0.3
phage	36hr PHYTO6 MOI 1	+0.3	-1.0	+0.3	-0.0	-0.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4	-0.4	+0.4	+0.2	-1.0
phage	36hr PHYTO1 MOI 1	+0.1	+0.4	+0.2	+0.2	-1.3
phage	36hr PHYTO2 MOI 1	+0.4	+0.4	+0.3	+0.0	-1.1
phage	24hr PHYTO3 MOI 10	-0.0	-0.5	+1.0	+0.3	-0.6
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	+0.1	+1.2	-0.4	+0.5	-1.0
phage	24hr PHYTO2 MOI 0.1	+0.3	+0.7	+0.3	+0.1	-0.9
phage	24hr PHYTO MOI 0.1	+0.2	+1.0	+0.1	+0.1	-0.9
phage	36hr PHYTO8 MOI 0.1	+0.3	+0.3	+0.7	+0.3	-1.0
phage	36hr PHYTO7 MOI 1	+0.3	+0.9	+0.2	+0.3	-0.6
phage	36hr PHYTO11 MOI 0.1	+0.1	+1.4	+0.4	+0.3	-0.7
temperature	LB, 37C	+0.3	+0.3	+0.5	-0.3	+1.6