Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS06435 and BPHYT_RS06440 overlap by 1 nucleotidesBPHYT_RS06440 and BPHYT_RS06445 overlap by 4 nucleotidesBPHYT_RS06445 and BPHYT_RS06450 are separated by 81 nucleotidesBPHYT_RS06450 and BPHYT_RS06455 are separated by 35 nucleotides BPHYT_RS06435: BPHYT_RS06435 - hypothetical protein, at 1,463,774 to 1,463,884 _RS06435 BPHYT_RS06440: BPHYT_RS06440 - ATPase, at 1,463,884 to 1,463,976 _RS06440 BPHYT_RS06445: BPHYT_RS06445 - ATPase, at 1,463,973 to 1,465,778 _RS06445 BPHYT_RS06450: BPHYT_RS06450 - potassium-transporting ATPase subunit B, at 1,465,860 to 1,467,944 _RS06450 BPHYT_RS06455: BPHYT_RS06455 - potassium-transporting ATPase C chain, at 1,467,980 to 1,468,558 _RS06455
Group Condition BPHYT_RS06435 BPHYT_RS06440 BPHYT_RS06445 BPHYT_RS06450 BPHYT_RS06455
nitrogen source L-Lysine (N) -0.9 -0.1 -0.4 -1.2 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -0.3 -0.3 -0.2 -0.5
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -2.1 +0.0 +0.1 -0.3 +0.1
carbon source Phenylacetic 5 mM (C) -0.8 -0.1 -0.5 +0.4 -0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -0.8 +0.0 -0.3 +0.7
phage 36hr PHYTO10 MOI 10 -1.1 -0.7 +0.2 +0.2 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.7 +0.6 -0.2 +0.5 +0.5
phage 36hr PHYTO3 MOI 1 +1.0 -1.0 -0.1 +0.2 -0.3
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.1 -0.2 -0.1 +0.5 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -0.7 +0.0 +0.1 +1.2
phage 24hr PHYTO7 MOI 10 -1.9 -0.3 +0.2 +0.4 +1.6
phage 36hr PHYTO6 MOI 10 +1.0 -1.0 -0.1 +0.1 +0.2
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.9 -0.3 -0.3 -0.4 +0.3
nophagecontrol 36hr Phyto Lib Only +0.7 -0.6 -0.4 +0.3 +0.4
phage 24hr PHYTO MOI 0.1 +0.7 -1.0 -0.1 +0.1 +0.8
supernatant control Vogels_fungal_media 0.1X +0.1 +0.3 -0.7 -0.2 +1.1
phage 24hr PHYTO MOI 0.1 +1.2 -0.3 +0.1 +0.3 -0.5
phage 24hr PHYTO6 MOI 10 +0.3 -0.8 -0.3 +0.2 +1.4
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 -0.7 -0.3 +0.4 +1.1
phage P. phyto corn MOI 1 +1.3 -0.6 +0.2 -0.1 +0.4
phage P. phyto PHYTO2 MOI 1 +1.4 -0.5 -0.1 -0.0 +0.4
phage 24hr PHYTO9 MOI 10 +0.9 -0.8 +0.1 +0.4 +0.9
vitamin No vitamins t2 +1.9 +0.2 -0.3 -0.4 +0.5
phage 36hr PHYTO6 MOI 0.1 +0.5 -0.3 +0.2 +0.4 +1.3
temperature LB 37C +1.1 -0.4 +0.1 +0.8 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +0.8 +0.1 +0.5 -0.1
phage 36hr PHYTO2 MOI 0.1 +1.4 -0.0 -0.3 +0.1 +1.0
vitamin With vitamins t1 +1.4 +0.4 -0.1 -0.2 +0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +0.6 -0.1 +0.6 +0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.1 +0.7 +0.1 +0.8 +0.9
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BPHYT_RS06435
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