Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS06025	BPHYT_RS06030	BPHYT_RS06035	BPHYT_RS06040	BPHYT_RS06045
nitrogen source	L-Proline (N)	-0.0	-0.2	-0.1	-0.5	-4.5
nitrogen source	L-Lysine (N)	-0.6	-0.4	-0.2	+0.2	-4.1
nitrogen source	L-Serine (N)	-0.6	-0.1	-0.1	-0.2	-3.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	-0.3	+0.0	-0.3	-0.2	-4.2
nitrogen source	Uridine (N)	+0.3	-0.0	-0.1	-0.1	-4.8
nitrogen source	Carnitine Hydrochloride (N)	-0.3	-0.1	-0.0	+0.3	-4.6
carbon source	D-Glucose (C)	+0.1	+0.0	-0.2	-0.5	-3.9
nitrogen source	D-Alanine (N)	-0.0	-0.2	+0.0	+0.1	-4.4
nutrient	Min media with glucose	-0.6	+0.1	-0.2	+0.1	-3.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-0.4	+0.2	+0.1	+0.3	-4.6
nitrogen source	L-Asparagine (N)	-0.4	+0.0	-0.1	-0.0	-3.8
carbon source	D-Ribose (C)	-0.0	+0.1	-0.1	+0.0	-4.3
carbon source	D-Gluconic Acid (C)	-0.2	+0.0	+0.0	+0.2	-4.3
carbon source	NAG (C)	-0.3	-0.0	-0.1	-0.2	-3.6
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	-0.7	-0.1	+0.1	-0.3	-3.2
carbon source	D-Glucose (C)	-0.3	-0.1	-0.0	+0.3	-4.1
nitrogen source	L-Glutamine (N)	-0.0	-0.1	+0.1	+0.5	-4.5
nitrogen source	Ammonium chloride (N)	-0.1	-0.3	+0.4	+0.3	-4.3
nitrogen source	L-Alanine (N)	-0.0	+0.0	+0.1	+0.1	-4.0
nitrogen source	L-Citrulline (N)	+0.2	-0.0	-0.1	+0.1	-4.1
nitrogen source	NAG (N)	+0.4	-0.2	-0.1	+0.3	-4.0
nutrient	L-Histidine	+0.3	-0.0	+0.2	+0.2	-4.2
supernatant control	Vogels_fungal_media; pH 5.5	+0.1	-0.2	-0.3	+1.0	-4.0
carbon source	D-Glucose 20 mM (C)	-0.2	-0.1	+0.1	+0.4	-3.6
carbon source	D-Glucose 20 mM (C)	-0.5	+0.1	-0.1	+0.4	-3.2
nutrient	L-Serine	+0.4	+0.0	+0.2	-0.3	-3.5
vitamin	With vitamins t2	+0.6	-0.1	-0.1	+0.1	-3.7
nutrient	L-Histidine	+0.5	+0.1	+0.1	-0.0	-3.5
nitrogen source	L-Glutamic (N)	+0.6	-0.0	+0.5	+0.4	-4.1
vitamin	No vitamins t1	+0.3	-0.1	+0.1	+0.6	-3.1