Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS05665 and BPHYT_RS05670 are separated by 104 nucleotidesBPHYT_RS05670 and BPHYT_RS05675 overlap by 11 nucleotidesBPHYT_RS05675 and BPHYT_RS05680 are separated by 53 nucleotidesBPHYT_RS05680 and BPHYT_RS05685 are separated by 52 nucleotides BPHYT_RS05665: BPHYT_RS05665 - integrase, at 1,293,672 to 1,294,769 _RS05665 BPHYT_RS05670: BPHYT_RS05670 - hypothetical protein, at 1,294,874 to 1,296,013 _RS05670 BPHYT_RS05675: BPHYT_RS05675 - hypothetical protein, at 1,296,003 to 1,297,013 _RS05675 BPHYT_RS05680: BPHYT_RS05680 - DNA-cytosine methyltransferase, at 1,297,067 to 1,298,020 _RS05680 BPHYT_RS05685: BPHYT_RS05685 - hypothetical protein, at 1,298,073 to 1,298,306 _RS05685
Group Condition BPHYT_RS05665 BPHYT_RS05670 BPHYT_RS05675 BPHYT_RS05680 BPHYT_RS05685
carbon source succinate (C) -0.2 -2.4 -1.6 N.D. N.D.
r2a control R2A control +0.2 -1.2 -1.4 N.D. N.D.
carbon source L-Glutamine (C) +0.2 -0.9 -1.3 N.D. N.D.
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.7 -0.6 -0.4 N.D. N.D.
r2a control R2A control +0.4 -1.1 -1.1 N.D. N.D.
r2a control R2A control +0.6 -0.7 -1.0 N.D. N.D.
phage 36hr PHYTO4 MOI 1 -0.1 +1.2 -0.7 N.D. N.D.
phage 36hr PHYTO10 MOI 10 -0.5 +1.0 +0.3 N.D. N.D.
phage 36hr PHYTO7 MOI 0.1 -0.2 +1.3 -0.2 N.D. N.D.
phage 36hr PHYTO4 MOI 1 -0.0 +1.4 -0.4 N.D. N.D.
phage 36hr PHYTO6 MOI 0.1 +0.3 +1.1 -0.3 N.D. N.D.
phage 24hr PHYTO6 MOI 1 -0.3 +1.1 +0.3 N.D. N.D.
phage 36hr PHYTO6 MOI 10 +0.1 +1.3 -0.3 N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.4 +0.6 +1.0 N.D. N.D.
supernatant control Vogels_fungal_media 0.1X -0.5 +1.1 +0.7 N.D. N.D.
nophagecontrol 24hr Phyto Lib Only +0.2 +1.2 -0.2 N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.3 +1.0 +0.7 N.D. N.D.
nophagecontrol 24hr Phyto Lib Only +0.5 +1.1 -0.1 N.D. N.D.
nophagecontrol 36hr Phyto Lib only -0.0 +1.5 +0.1 N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.4 +0.7 +1.4 N.D. N.D.
supernatant control Vogels_fungal_media 0.1X -0.2 +0.9 +0.9 N.D. N.D.
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.2 +0.9 +1.0 N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.3 +1.2 +0.8 N.D. N.D.
phage 36hr PHYTO8 MOI 10 +0.5 +1.4 -0.1 N.D. N.D.
phage 24hr PHYTO7 MOI 10 +0.1 +0.9 +0.8 N.D. N.D.
phage 36hr PHYTO2 MOI 1 -0.0 +1.6 +0.2 N.D. N.D.
phage 24hr PHYTO4 MOI 10 -0.2 +1.9 +0.2 N.D. N.D.
phage 36hr PHYTO2 MOI 1 +0.0 +1.8 +0.1 N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.0 +1.1 +1.2 N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.4 +1.3 +0.9 N.D. N.D.
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BPHYT_RS05665
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BPHYT_RS05670
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BPHYT_RS05685
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