Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS05430 and BPHYT_RS05435 are separated by 417 nucleotidesBPHYT_RS05435 and BPHYT_RS05440 are separated by 245 nucleotidesBPHYT_RS05440 and BPHYT_RS05445 overlap by 2 nucleotidesBPHYT_RS05445 and BPHYT_RS05450 are separated by 841 nucleotides BPHYT_RS05430: BPHYT_RS05430 - GntR family transcriptional regulator, at 1,247,214 to 1,248,629 _RS05430 BPHYT_RS05435: BPHYT_RS05435 - ABC transporter substrate-binding protein, at 1,249,047 to 1,250,210 _RS05435 BPHYT_RS05440: BPHYT_RS05440 - hypothetical protein, at 1,250,456 to 1,250,650 _RS05440 BPHYT_RS05445: BPHYT_RS05445 - hypothetical protein, at 1,250,649 to 1,250,831 _RS05445 BPHYT_RS05450: BPHYT_RS05450 - AraC family transcriptional regulator, at 1,251,673 to 1,252,074 _RS05450
Group Condition BPHYT_RS05430 BPHYT_RS05435 BPHYT_RS05440 BPHYT_RS05445 BPHYT_RS05450
phage 36hr PHYTO4 MOI 1 -0.1 -1.2 -1.7 N.D. N.D.
phage 24hr PHYTO4 MOI 10 -0.0 -1.1 -1.8 N.D. N.D.
phage 24hr PHYTO3 MOI 10 +0.0 +0.1 -2.5 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -0.4 -1.2 N.D. N.D.
phage 36hr PHYTO4 MOI 0.1 -0.1 -0.5 -1.3 N.D. N.D.
phage 36hr PHYTO3 MOI 1 -0.1 -0.5 -1.1 N.D. N.D.
carbon source adipate (C) -0.0 -0.2 -1.4 N.D. N.D.
phage 36hr PHYTO3 MOI 0.1 -0.3 -0.6 -0.8 N.D. N.D.
phage 24hr PHYTO3 MOI 10 +0.2 -0.6 -1.2 N.D. N.D.
phage 24hr PHYTO MOI 0.1 +0.0 -0.5 -1.1 N.D. N.D.
phage 24hr PHYTO6 MOI 1 -0.2 -0.5 -0.9 N.D. N.D.
nophagecontrol 24hr Phyto Lib only -0.1 -0.5 -1.0 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -0.4 -0.6 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -0.2 -0.7 N.D. N.D.
phage PHYTO3 MOI 0.1 +0.1 -0.5 -1.1 N.D. N.D.
phage 36hr PHYTO4 MOI 1 +0.2 -0.3 -1.3 N.D. N.D.
phage 24hr PHYTO3 MOI 1 +0.2 -1.0 -0.6 N.D. N.D.
phage 36hr PHYTO11 MOI 0.1 +0.2 -0.5 -1.0 N.D. N.D.
phage 36hr PHYTO6 MOI 0.1 +0.2 -0.8 -0.7 N.D. N.D.
phage 36hr PHYTO10 MOI 1 +0.2 -0.6 -0.7 N.D. N.D.
phage 36hr PHYTO2 MOI 1 +0.6 -0.9 -0.9 N.D. N.D.
phage 36hr PHYTO8 MOI 10 +0.2 -0.5 -0.8 N.D. N.D.
phage 36hr PHYTO11 MOI 1 +0.2 -0.5 -0.8 N.D. N.D.
phage 36hr PHYTO3 MOI 1 +0.3 -0.9 -0.4 N.D. N.D.
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.4 -0.7 -0.7 N.D. N.D.
phage 24hr PHYTO1 MOI 10 +0.4 -1.0 -0.3 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +0.5 -0.8 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 +1.3 +0.3 N.D. N.D.
nitrogen source D-Alanine (N) +0.4 +0.4 +0.7 N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.7 +0.3 +0.6 N.D. N.D.
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