Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS05220 and BPHYT_RS05225 are separated by 122 nucleotidesBPHYT_RS05225 and BPHYT_RS05230 are separated by 403 nucleotidesBPHYT_RS05230 and BPHYT_RS05235 overlap by 1 nucleotidesBPHYT_RS05235 and BPHYT_RS05240 are separated by 2 nucleotides BPHYT_RS05220: BPHYT_RS05220 - S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB, at 1,202,054 to 1,202,806 _RS05220 BPHYT_RS05225: BPHYT_RS05225 - phosphoenolpyruvate carboxylase, at 1,202,929 to 1,206,156 _RS05225 BPHYT_RS05230: BPHYT_RS05230 - porphobilinogen deaminase, at 1,206,560 to 1,207,588 _RS05230 BPHYT_RS05235: BPHYT_RS05235 - bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase, at 1,207,588 to 1,209,606 _RS05235 BPHYT_RS05240: BPHYT_RS05240 - heme biosynthesis protein HemY, at 1,209,609 to 1,210,799 _RS05240
Group Condition BPHYT_RS05220 BPHYT_RS05225 BPHYT_RS05230 BPHYT_RS05235 BPHYT_RS05240
carbon source D-Ribose (C) +0.3 -5.7 N.D. -0.4 N.D.
carbon source D,L-Lactate (C) +0.2 -5.4 N.D. -0.6 N.D.
carbon source L-Lactate (C) +0.2 -5.2 N.D. -0.7 N.D.
nitrogen source L-Serine (N) -0.5 -6.2 N.D. +1.1 N.D.
vitamin With vitamins t1 -0.2 -4.6 N.D. -0.8 N.D.
carbon source D-Gluconic Acid (C) +0.6 -5.8 N.D. -0.3 N.D.
carbon source L-Tryptophan (C) +0.2 -5.2 N.D. -0.4 N.D.
carbon source D-Mannose (C) +0.2 -5.6 N.D. -0.0 N.D.
carbon source L-Fucose (C) -0.1 -5.6 N.D. +0.3 N.D.
nitrogen source NAG (N) -0.2 -5.8 N.D. +0.6 N.D.
carbon source D-Glucose (C) -0.5 -3.8 N.D. -1.1 N.D.
carbon source D-Xylose (C) +0.3 -6.6 N.D. +0.9 N.D.
carbon source L-Rhamnose (C) +0.3 -5.8 N.D. +0.2 N.D.
nitrogen source L-Alanine (N) +0.0 -5.9 N.D. +0.6 N.D.
carbon source D-Sorbitol (C) +0.1 -5.6 N.D. +0.3 N.D.
nitrogen source Uridine (N) -0.2 -5.2 N.D. +0.4 N.D.
nitrogen source Ammonium chloride (N) -0.0 -5.1 N.D. +0.2 N.D.
carbon source D-Glucose (C) +0.4 -4.9 N.D. -0.4 N.D.
carbon source L-Alanine (C) +0.4 -5.0 N.D. -0.2 N.D.
carbon source D,L-Lactate (C) +0.3 -4.8 N.D. -0.2 N.D.
carbon source m-Inositol (C) -0.0 -5.0 N.D. +0.4 N.D.
nitrogen source D-Alanine (N) -0.0 -4.9 N.D. +0.3 N.D.
vitamin No vitamins t2 +0.4 -4.7 N.D. -0.2 N.D.
vitamin With vitamins t2 +0.1 -4.9 N.D. +0.5 N.D.
carbon source Xylitol (C) +0.6 -5.3 N.D. +0.5 N.D.
nutrient L-Serine +0.1 -5.0 N.D. +0.7 N.D.
nutrient Min media with glucose +0.0 -4.9 N.D. +1.3 N.D.
carbon source D,L-Lactate (C) +0.0 -4.5 N.D. +0.8 N.D.
carbon source D-Glucose 20 mM (C) -0.3 -4.2 N.D. +1.2 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.2 -4.0 N.D. +1.2 N.D.
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BPHYT_RS05220
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BPHYT_RS05225
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BPHYT_RS05240
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