Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS04735 and BPHYT_RS04740 are separated by 110 nucleotidesBPHYT_RS04740 and BPHYT_RS04745 are separated by 25 nucleotidesBPHYT_RS04745 and BPHYT_RS04750 are separated by 65 nucleotidesBPHYT_RS04750 and BPHYT_RS04755 are separated by 14 nucleotides BPHYT_RS04735: BPHYT_RS04735 - phosphoadenosine phosphosulfate reductase, at 1,094,249 to 1,094,995 _RS04735 BPHYT_RS04740: BPHYT_RS04740 - sulfate adenylyltransferase subunit 2, at 1,095,106 to 1,096,068 _RS04740 BPHYT_RS04745: BPHYT_RS04745 - sulfate adenylyltransferase, at 1,096,094 to 1,097,410 _RS04745 BPHYT_RS04750: BPHYT_RS04750 - uroporphyrin-III C-methyltransferase, at 1,097,476 to 1,098,231 _RS04750 BPHYT_RS04755: BPHYT_RS04755 - AraC family transcriptional regulator, at 1,098,246 to 1,099,271 _RS04755
Group Condition BPHYT_RS04735 BPHYT_RS04740 BPHYT_RS04745 BPHYT_RS04750 BPHYT_RS04755
carbon source Protocatechuic Acid (C) N.D. -4.9 -3.4 -3.3 -0.1
nutrient L-Histidine N.D. -5.4 -3.5 -1.3 -0.4
nutrient L-Histidine N.D. -5.0 -3.0 -2.6 +0.1
nitrogen source L-Citrulline (N) N.D. -5.6 -3.1 -1.9 +0.2
nutrient L-Serine N.D. -5.5 -2.8 -1.6 -0.4
carbon source L-Malic (C) N.D. -4.8 -4.3 -0.9 -0.1
carbon source Malonic (C) N.D. -4.4 -3.5 -1.3 -0.8
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X N.D. -5.3 -2.7 -1.7 +0.2
nitrogen source Ammonium chloride (N) N.D. -6.4 -2.5 -0.6 -0.0
carbon source Azelaic (C) N.D. -4.7 -3.8 -0.5 -0.4
vitamin With vitamins t1 N.D. -4.7 -3.0 -1.8 +0.1
vitamin No vitamins t2 N.D. -4.6 -2.6 -1.4 -0.7
nutrient L-Serine N.D. -4.9 -3.1 -1.2 -0.0
nutrient Min media with glucose N.D. -5.7 -2.4 -1.0 -0.2
carbon source L-Glutamine (C) N.D. -6.2 -2.9 -0.3 +0.1
nitrogen source L-Asparagine (N) N.D. -6.1 -2.3 -0.8 +0.2
nitrogen source L-Glutamine (N) N.D. -6.0 -2.9 -0.6 +0.4
nitrogen source Uridine (N) N.D. -6.0 -3.0 +0.2 -0.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X N.D. -4.2 -2.9 -1.9 +0.2
vitamin With vitamins t2 N.D. -4.5 -2.2 -2.2 +0.1
carbon source Dodecandioic (C) N.D. -4.6 -2.5 -1.2 -0.5
nitrogen source L-Lysine (N) N.D. -4.5 -4.3 -0.2 +0.2
carbon source succinate (C) N.D. -4.4 -2.8 -1.6 +0.1
vitamin No vitamins t1 N.D. -4.3 -3.7 -0.9 +0.2
nutrient Min media with glucose N.D. -4.8 -2.6 -1.3 +0.1
carbon source D,L-Lactate (C) N.D. -3.5 -4.4 -0.7 +0.1
nitrogen source L-Alanine (N) N.D. -5.3 -2.9 +0.2 -0.3
nitrogen source L-Glutamic (N) N.D. -5.6 -2.8 +0.1 +0.4
carbon source Tween 20 (C) N.D. -6.7 -2.7 +1.0 +0.7
supernatant control Vogels_fungal_media; pH 5.5 N.D. -4.4 -3.7 +0.5 +0.6
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BPHYT_RS04735
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BPHYT_RS04740
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BPHYT_RS04750
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BPHYT_RS04755
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