Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS04720 and BPHYT_RS04725 are separated by 220 nucleotidesBPHYT_RS04725 and BPHYT_RS04730 are separated by 22 nucleotidesBPHYT_RS04730 and BPHYT_RS04735 overlap by 4 nucleotidesBPHYT_RS04735 and BPHYT_RS04740 are separated by 110 nucleotides BPHYT_RS04720: BPHYT_RS04720 - transcriptional regulator, at 1,090,849 to 1,091,790 _RS04720 BPHYT_RS04725: BPHYT_RS04725 - sulfite reductase, at 1,092,011 to 1,093,690 _RS04725 BPHYT_RS04730: BPHYT_RS04730 - required for sulfate utilization, putative electron transport protein for sulfite reductase (from data), at 1,093,713 to 1,094,252 _RS04730 BPHYT_RS04735: BPHYT_RS04735 - phosphoadenosine phosphosulfate reductase, at 1,094,249 to 1,094,995 _RS04735 BPHYT_RS04740: BPHYT_RS04740 - sulfate adenylyltransferase subunit 2, at 1,095,106 to 1,096,068 _RS04740
Group Condition BPHYT_RS04720 BPHYT_RS04725 BPHYT_RS04730 BPHYT_RS04735 BPHYT_RS04740
nitrogen source Ammonium chloride (N) -4.3 -7.1 -3.6 N.D. -6.4
carbon source Tween 20 (C) -5.1 -5.2 -3.1 N.D. -6.7
nitrogen source Uridine (N) -4.3 -6.0 -2.9 N.D. -6.0
carbon source Protocatechuic Acid (C) -3.9 -7.3 -3.0 N.D. -4.9
nitrogen source L-Glutamic (N) -4.7 -5.8 -2.9 N.D. -5.6
nitrogen source L-Glutamine (N) -3.5 -5.8 -3.0 N.D. -6.0
nitrogen source L-Asparagine (N) -3.2 -5.5 -3.4 N.D. -6.1
nitrogen source D-Alanine (N) -4.5 -5.8 -2.8 N.D. -5.0
carbon source NAG (C) -3.6 -5.2 -3.7 N.D. -5.4
nutrient L-Histidine -3.6 -5.8 -3.0 N.D. -5.4
carbon source L-Proline (C) -4.7 -5.3 -3.0 N.D. -4.8
nitrogen source L-Lysine (N) -5.8 -3.6 -3.9 N.D. -4.5
carbon source D-Mannose (C) -3.3 -6.8 -3.3 N.D. -4.2
carbon source L-Glutamine (C) -3.3 -5.1 -2.9 N.D. -6.2
supernatant control Vogels_fungal_media; pH 5.5 -3.8 -6.6 -2.6 N.D. -4.4
nitrogen source Putrescine (N) -4.1 -5.3 -3.0 N.D. -5.1
carbon source D-Galactose (C) -3.3 -5.5 -3.6 N.D. -4.8
vitamin With vitamins t2 -4.8 -5.2 -2.8 N.D. -4.5
nutrient Min media with glucose -3.6 -5.6 -3.1 N.D. -4.8
nutrient L-Histidine -3.8 -4.9 -3.2 N.D. -5.0
nutrient Min media with glucose -3.6 -4.6 -3.0 N.D. -5.7
carbon source D-Sorbitol (C) -3.6 -5.3 -3.3 N.D. -4.3
nutrient L-Serine -3.4 -4.6 -2.9 N.D. -5.5
nitrogen source L-Citrulline (N) -3.0 -5.1 -2.8 N.D. -5.6
vitamin With vitamins t1 -3.5 -5.1 -3.1 N.D. -4.7
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -3.9 -3.9 -3.1 N.D. -5.3
nitrogen source L-Proline (N) -3.1 -5.3 -3.4 N.D. -4.5
carbon source Dodecandioic (C) -3.2 -4.7 -3.7 N.D. -4.6
carbon source Phenylacetic 5 mM (C) -2.8 -7.4 -2.5 N.D. -3.4
nutrient L-Serine -2.9 -5.3 -2.9 N.D. -4.9
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BPHYT_RS04720
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BPHYT_RS04725
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