Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS04025	BPHYT_RS04030	BPHYT_RS04035	BPHYT_RS04040	BPHYT_RS04045
phage	36hr PHYTO2 MOI 1	N.D.	-0.7	+0.2	-0.6	-0.4
phage	24hr PHYTO3 MOI 10	N.D.	-0.4	+0.5	-1.1	-0.1
phage	24hr PHYTO1 MOI 1	N.D.	-0.3	+0.4	-0.7	-0.4
phage	36hr PHYTO3 MOI 1	N.D.	-0.5	+0.4	-0.5	-0.3
phage	24hr PHYTO4 MOI 10	N.D.	-0.4	+0.6	-1.0	-0.1
phage	24hr PHYTO9 MOI 0.1	N.D.	-0.4	+0.5	-0.4	-0.5
phage	24hr PHYTO6 MOI 0.1	N.D.	-0.7	+0.5	-0.6	-0.1
phage	24hr PHYTO MOI 0.1	N.D.	-0.0	+0.6	-1.0	-0.3
nophagecontrol	24hr Phyto Lib Only	N.D.	-0.6	+0.6	-0.4	-0.1
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	N.D.	-0.5	-0.6	+0.2	+0.4
phage	36hr PHYTO2 MOI 1	N.D.	+0.3	+0.4	-1.1	-0.0
carbon source	2-Deoxy-D-ribonic lithium salt (C)	N.D.	-0.1	-0.5	-0.6	+0.7
phage	36hr PHYTO1 MOI 10	N.D.	-0.1	+0.5	-1.0	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	N.D.	+0.6	-0.3	-0.8	+0.2
nophagecontrol	36hr Phyto Lib Only	N.D.	-0.3	+0.7	-0.8	+0.3
phage	36hr PHYTO8 MOI 10	N.D.	+0.1	+0.7	-0.6	-0.3
phage	36hr PHYTO MOI 0.1	N.D.	-0.1	+1.0	-0.7	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	N.D.	-0.4	+1.0	-0.2	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	N.D.	-0.6	+0.2	-0.4	+1.1
phage	24hr PHYTO3 MOI 1	N.D.	-0.1	+0.9	-0.6	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	N.D.	+0.5	+0.3	-0.8	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	N.D.	-0.4	-0.4	+0.0	+1.3
in planta	Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.1	+1.3	-0.3	+0.1
carbon source	Tween 20 (C)	N.D.	-0.6	+0.9	+0.9	+0.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	N.D.	+0.3	+0.5	+0.5	+0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB	N.D.	+0.2	+0.1	+1.2	+0.4
carbon source	L-Fucose (C)	N.D.	+0.1	+1.1	+0.9	+0.6
carbon source	D-Xylose (C)	N.D.	+0.1	+1.1	+1.0	+1.0
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	N.D.	+0.0	+1.5	+1.2	+0.8
carbon source	Xylitol (C)	N.D.	+0.1	+1.7	+1.0	+1.7