Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

Group	Condition	BPHYT_RS03220	BPHYT_RS03225	BPHYT_RS03230	BPHYT_RS03235	BPHYT_RS03240
carbon source	Tween 20 (C)	-2.7	-1.4	-0.8	+0.2	-0.2
carbon source	m-Inositol (C)	-0.5	-0.3	-0.5	-1.1	-0.3
motility	outer cut, LB soft agar motility assay	-0.1	-0.1	-0.5	-0.8	-1.1
phage	36hr PHYTO4 MOI 1	+0.3	+0.2	+0.3	-2.6	-0.6
carbon source	Trisodium citrate (C)	-1.1	-0.2	-0.4	-0.5	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.0	-0.3	-0.0	-1.6	-0.4
phage	24hr PHYTO4 MOI 10	+0.1	+0.3	-0.0	-1.9	-0.8
motility	outer cut, LB soft agar motility assay	-0.0	+0.0	-0.5	-0.3	-1.4
carbon source	Sebacic (C)	+0.4	-0.1	+0.0	-1.2	-1.0
pH	LB, pH4	+0.0	+0.3	-0.2	-0.4	-1.4
phage	36hr PHYTO2 MOI 1	+0.1	+0.3	-0.4	-1.3	-0.5
in planta	Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10	+0.9	-0.0	-0.4	-0.7	-1.4
nophagecontrol	24hr Phyto Lib Only	+0.1	+0.1	+0.1	-0.4	-1.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	+0.4	+0.1	-0.3	-1.4
phage	P. phyto PHYTO2 MOI 0.1	+0.1	-0.2	-0.3	+0.2	-1.3
phage	24hr PHYTO7 MOI 1	-0.0	-0.0	-0.4	+0.9	-1.6
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.2	-0.1	+0.2	-0.7	-0.8
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	-0.2	+0.4	+0.5	+0.2	-2.0
vitamin	No vitamins t1	-0.2	+0.0	-0.4	-1.1	+0.8
in planta	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1	+0.8	+0.3	+0.0	-0.4	-1.3
nophagecontrol	36hr Phyto Lib only	+0.2	+0.3	-0.3	+0.3	-1.1
phage	24hr PHYTO3 MOI 10	+0.5	+0.1	-0.4	+0.3	-1.1
phage	36hr PHYTO6 MOI 10	+0.3	+0.4	+0.3	-0.9	-0.6
phage	24hr PHYTO8 MOI 1	-0.3	+0.2	-0.6	+0.6	-0.4
carbon source	2-Deoxy-D-ribonic lithium salt (C)	-0.1	-0.1	+0.7	-1.1	+0.1
phage	24hr PHYTO10 MOI 10	+0.3	+0.2	+0.4	-0.5	-0.7
phage	24hr PHYTO2 MOI 1	+0.2	+0.3	+0.5	-1.2	+0.0
stress	Bacitracin 0.25 mg/ml	+0.3	+0.5	+0.3	-0.7	-0.3
stress	Paraquat dichloride 0.064 mg/ml	+1.4	+0.2	+0.2	-0.1	-0.7
phage	36hr PHYTO2 MOI 1	+0.3	+0.6	+0.4	+0.6	-0.7