Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS03135	BPHYT_RS03140	BPHYT_RS03145	BPHYT_RS03150	BPHYT_RS03155
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-5.8	-0.2	N.D.	-6.5	+0.8
in planta	Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10	-3.3	-0.1	N.D.	-6.9	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-3.2	-0.3	N.D.	-6.2	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days	-3.1	+0.3	N.D.	-6.4	-0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-2.4	-0.2	N.D.	-5.7	-1.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-3.1	-0.2	N.D.	-5.6	-0.3
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-3.5	-0.0	N.D.	-5.9	+0.3
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-4.2	+0.2	N.D.	-5.2	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-2.1	-0.3	N.D.	-6.2	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-2.5	-0.5	N.D.	-5.6	-0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-2.6	-0.3	N.D.	-5.0	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-2.9	-0.1	N.D.	-5.9	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-2.2	-0.2	N.D.	-5.8	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-2.2	-0.2	N.D.	-5.6	+0.0
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	-0.6	-0.3	N.D.	-7.5	+0.5
nitrogen source	Ammonium chloride (N)	-0.1	-0.2	N.D.	-6.6	-1.0
carbon source	L-Proline (C)	-0.5	-0.0	N.D.	-6.5	-0.4
nitrogen source	L-Citrulline (N)	-0.6	-0.1	N.D.	-6.0	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-1.8	+0.5	N.D.	-4.8	-1.2
nitrogen source	L-Glutamic (N)	-0.6	-0.2	N.D.	-6.4	+0.0
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-1.6	-0.3	N.D.	-5.6	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-1.0	+0.3	N.D.	-5.1	-1.0
carbon source	L-Asparagine (C)	-0.4	-0.1	N.D.	-6.6	+0.7
carbon source	L-Rhamnose (C)	-0.3	+0.0	N.D.	-6.6	+0.5
carbon source	D-Gluconic Acid (C)	-0.0	+0.0	N.D.	-6.9	+0.5
carbon source	L-Phenylalanine (C)	-0.2	-0.1	N.D.	-6.4	+0.5
nitrogen source	L-Asparagine (N)	-0.1	-0.0	N.D.	-6.5	+0.7
carbon source	L-Glutamine (C)	-0.3	+0.3	N.D.	-7.3	+1.2
carbon source	D-Glucose (C)	+0.2	+0.4	N.D.	-6.2	+1.0
vitamin	No vitamins t2	-0.5	-0.4	N.D.	-5.1	+1.3