Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS02800 and BPHYT_RS02805 are separated by 25 nucleotidesBPHYT_RS02805 and BPHYT_RS02810 are separated by 98 nucleotidesBPHYT_RS02810 and BPHYT_RS02815 are separated by 240 nucleotidesBPHYT_RS02815 and BPHYT_RS02820 are separated by 112 nucleotides BPHYT_RS02800: BPHYT_RS02800 - 5-carboxymethyl-2-hydroxymuconate isomerase, at 628,472 to 629,170 _RS02800 BPHYT_RS02805: BPHYT_RS02805 - maleylacetoacetate isomerase, at 629,196 to 629,840 _RS02805 BPHYT_RS02810: BPHYT_RS02810 - cell division protein FtsY, at 629,939 to 631,099 _RS02810 BPHYT_RS02815: BPHYT_RS02815 - methyltransferase, at 631,340 to 631,954 _RS02815 BPHYT_RS02820: BPHYT_RS02820 - phosphopantetheine adenylyltransferase, at 632,067 to 632,582 _RS02820
Group Condition BPHYT_RS02800 BPHYT_RS02805 BPHYT_RS02810 BPHYT_RS02815 BPHYT_RS02820
carbon source D-Glucose (C) -0.4 -0.2 N.D. -0.9 N.D.
phage 36hr PHYTO11 MOI 0.1 -0.1 -0.2 N.D. -1.1 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.1 N.D. -1.4 N.D.
supernatant control Vogels_fungal_media; pH 5.5 -0.6 -0.3 N.D. -0.5 N.D.
phage 36hr PHYTO9 MOI 0.1 +0.1 +0.1 N.D. -1.5 N.D.
phage 24hr PHYTO2 MOI 1 -0.4 -0.1 N.D. -0.9 N.D.
nophagecontrol 24hr Phyto Lib only -0.1 -0.2 N.D. -1.1 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 -0.1 N.D. -1.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 +0.1 N.D. -1.3 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.2 N.D. -1.5 N.D.
stress Nickel (II) chloride 1 mM +0.1 -0.3 N.D. -1.0 N.D.
phage 36hr PHYTO7 MOI 1 +0.1 -0.2 N.D. -1.1 N.D.
phage 24hr PHYTO6 MOI 0.1 -0.2 +0.2 N.D. -1.2 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -0.1 N.D. -1.2 N.D.
phage 36hr PHYTO3 MOI 1 +0.1 -0.1 N.D. -1.2 N.D.
phage 36hr PHYTO2 MOI 1 -0.2 +0.1 N.D. -1.1 N.D.
phage 24hr PHYTO7 MOI 10 +0.4 -0.2 N.D. -1.2 N.D.
phage 24hr PHYTO6 MOI 1 -0.2 +0.2 N.D. -1.0 N.D.
phage 36hr PHYTO8 MOI 0.1 +0.1 +0.3 N.D. -1.4 N.D.
phage 24hr PHYTO9 MOI 10 +0.1 +0.1 N.D. -1.1 N.D.
stress Paraquat dichloride 0.032 mg/ml +0.5 -0.0 N.D. -1.3 N.D.
phage 36hr PHYTO4 MOI 1 +0.1 +0.2 N.D. -1.0 N.D.
r2a control R2A control +0.4 -0.3 N.D. -0.7 N.D.
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.4 +0.2 N.D. -1.1 N.D.
nophagecontrol 36hr Phyto Lib only +0.4 +0.2 N.D. -0.8 N.D.
carbon source D-Galacturonic Acid (C) +0.6 +0.1 N.D. -0.6 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.4 +0.1 N.D. +0.9 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.0 +0.5 N.D. +0.8 N.D.
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.2 +0.7 N.D. +0.8 N.D.
stress Lomefloxacin 0.001 mM +0.0 +0.0 N.D. +1.8 N.D.
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